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BioMed Research International
/
2015
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Article
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Tab 4
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Research Article
Development of Microsatellite Markers Derived from Expressed Sequence Tags of Polyporales for Genetic Diversity Analysis of Endangered
Polyporus umbellatus
Table 4
Analysis of SSR markers in the EST sequences of Coriolaceae.
Nucleotide repeat
Number of SSR markers
Percentage (%)
Frequency %
Number of motif types
Abundant motifs
Number of abundant motifs
The percentage of abundant motifs (%)
Mono-
1607
70.27
3.33
2
C/G
853
53.08
Di-
145
6.34
0.30
4
AG/CT
CG/CG
112
77.24
Tri-
430
18.80
0.89
10
AGC/CTG
CCG/CGG
169
39.30
Tetra-
9
0.39
0.018
5
ACAT/ATGT
ACGC/CGTG
6
66.67
Penta-
12
0.52
0.024
2
ATCGC/ATGCG
11
91.67
Hexa-
84
3.67
0.17
12
ACGAGC/CGTGCT
AGCCTG/AGGCTC
71
84.52
Total
2287
100
4.74
35
ā
1222
ā