Distribution of Suicin Gene Clusters in Streptococcus suis Serotype 2 Belonging to Sequence Types 25 and 28
Table 1
Presence and absence of suicin regions and genes among S. suis serotype 2 strains of ST25 and ST28.
Strain
Sequence type
Suicin 65
Suicin 90-1330
Suicin 3908
Present or absent
Number of contigs
Present or absent
Number of contigs
Present or absent
Number of contigs
NSUI001
25
Mostly present
1
Absent
N/A
Absent
N/A
NSUI006
25
Mostly present
1
Absent
N/A
Absent
N/A
NSUI012
25
Mostly present
1
Absent
N/A
Absent
N/A
NSUI033
25
Present
1
Absent
N/A
Absent
N/A
NSUI034
25
Present
1
Absent
N/A
Absent
N/A
NSUI035
25
Present
2
Absent
N/A
Absent
N/A
NSUI037
25
Present
1
Absent
N/A
Absent
N/A
NSUI038
25
Present
1
Absent
N/A
Absent
N/A
NSUI039
25
Present
1
Absent
N/A
Absent
N/A
NSUI040
25
Present
1
Absent
N/A
Absent
N/A
NSUI041
25
Mostly present
2
Absent
N/A
Absent
N/A
NSUI042
25
Mostly present
1
Absent
N/A
Absent
N/A
NSUI043
25
Mostly present
1
Absent
N/A
Absent
N/A
NSUI044
25
Mostly present
2
Absent
N/A
Absent
N/A
NSUI045
25
Mostly present
2
Absent
N/A
Absent
N/A
NSUI046
25
Mostly present
2
Absent
N/A
Absent
N/A
NSUI047
25
Mostly present
1
Absent
N/A
Absent
N/A
NSUI048
25
Present
1
Absent
N/A
Absent
N/A
NSUI049
25
Mostly present
1
Absent
N/A
Absent
N/A
NSUI050
25
Absent
N/A
Absent
N/A
Absent
N/A
NSUI051
25
Absent
N/A
Absent
N/A
Absent
N/A
NSUI052
25
Mostly present
1
Absent
N/A
Absent
N/A
NSUI053
25
Mostly present
1
Absent
N/A
Absent
N/A
NSUI054
25
Mostly present
1
Absent
N/A
Absent
N/A
NSUI055
25
Mostly present
1
Absent
N/A
Absent
N/A
NSUI056
25
Mostly present
1
Absent
N/A
Absent
N/A
NSUI057
25
Mostly present
1
Absent
N/A
Absent
N/A
NSUI060
25
Mostly present
1
Absent
N/A
Absent
N/A
NSUI061
25
Mostly present
1
Absent
N/A
Absent
N/A
NSUI063
25
Mostly present
1
Absent
N/A
Absent
N/A
NSUI065
25
Mostly present
1
Absent
N/A
Absent
N/A
NSUI066
25
Mostly present
1
Absent
N/A
Absent
N/A
NSUI068
25
Mostly present
2
Absent
N/A
Absent
N/A
NSUI069
25
Present
1
Absent
N/A
Absent
N/A
NSUI070
25
Present
1
Absent
N/A
Absent
N/A
NSUI072
25
Mostly present
1
Absent
N/A
Absent
N/A
NSUI075
25
Mostly present
3
Absent
N/A
Absent
N/A
NSUI077
25
Present
1
Absent
N/A
Absent
N/A
NSUI078
25
Mostly present
1
Absent
N/A
Absent
N/A
NSUI082
25
Absent
N/A
Absent
N/A
Absent
N/A
NSUI088
25
Present
1
Absent
N/A
Absent
N/A
NSUI089
25
Mostly present
1
Absent
N/A
Absent
N/A
NSUI092
25
Present
1
Absent
N/A
Absent
N/A
NSUI093
25
Mostly present
1
Absent
N/A
Absent
N/A
NSUI094
25
Mostly present
1
Absent
N/A
Absent
N/A
NSUI096
25
Mostly present
1
Absent
N/A
Absent
N/A
NSUI097
25
Present
2
Absent
N/A
Absent
N/A
NSUI099
25
Present
1
Absent
N/A
Absent
N/A
NSUI100
25
Mostly present
3
Absent
N/A
Absent
N/A
NSUI102
25
Mostly present
1
Absent
N/A
Absent
N/A
NSUI103
25
Mostly present
1
Absent
N/A
Absent
N/A
NSUI002
28
Absent
N/A
Absent
N/A
Absent
N/A
NSUI003
28
Absent
N/A
Present
1
Absent
N/A
NSUI004
28
Absent
N/A
Absent
N/A
Absent
N/A
NSUI005
28
Absent
N/A
Present
1
Absent
N/A
NSUI007
28
Absent
N/A
Present
2
Absent
N/A
NSUI008
28
Absent
N/A
Absent
N/A
Absent
N/A
NSUI009
28
Absent
N/A
Present
1
Absent
N/A
NSUI010
28
Absent
N/A
Absent
N/A
Absent
N/A
NSUI011
28
Absent
N/A
Absent
N/A
Absent
N/A
NSUI013
28
Some genes
N/A
Absent
N/A
Absent
N/A
NSUI014
28
Absent
N/A
Absent
N/A
Absent
N/A
NSUI015
28
Absent
N/A
Present
1
Absent
N/A
NSUI016
28
Absent
N/A
Present
1
Absent
N/A
NSUI017
28
Absent
N/A
Present
1
Absent
N/A
NSUI018
28
Absent
N/A
Mostly present
1
Absent
N/A
NSUI019
28
Absent
N/A
Absent
N/A
Absent
N/A
NSUI020
28
Absent
N/A
Absent
N/A
Absent
N/A
NSUI021
28
Absent
N/A
Absent
N/A
Absent
N/A
NSUI022
28
Absent
N/A
Mostly present
2
Absent
N/A
NSUI023
28
Absent
N/A
Mostly present
2
Absent
N/A
NSUI024
28
Absent
N/A
Mostly present
2
Absent
N/A
NSUI025
28
Absent
N/A
Present
2
Absent
N/A
NSUI026
28
Absent
N/A
Mostly present
1
Absent
N/A
NSUI027
28
Present
1
Absent
N/A
Absent
N/A
NSUI028
28
Present
1
Absent
N/A
Absent
N/A
NSUI029
28
Absent
N/A
Absent
N/A
Absent
N/A
NSUI030
28
Present
1
Absent
N/A
Absent
N/A
NSUI031
28
Absent
N/A
Absent
N/A
Absent
N/A
NSUI032
28
Absent
N/A
Absent
N/A
Absent
N/A
NSUI036
28
Absent
N/A
Mostly present
1
Mostly present
1
NSUI058
28
Absent
N/A
Absent
N/A
Absent
N/A
NSUI059
28
Present
1
Absent
N/A
Absent
N/A
NSUI062
28
Absent
N/A
Absent
N/A
Absent
N/A
NSUI064
28
Absent
N/A
Absent
N/A
Absent
N/A
NSUI067
28
Present
1
Absent
N/A
Absent
N/A
NSUI073
28
Absent
N/A
Absent
N/A
Absent
N/A
NSUI074
28
Absent
N/A
Absent
N/A
Absent
N/A
NSUI076
28
Absent
N/A
Absent
N/A
Absent
N/A
NSUI079
28
Absent
N/A
Absent
N/A
Absent
N/A
NSUI080
28
Absent
N/A
Present
3
Absent
N/A
NSUI081
28
Absent
N/A
Absent
N/A
Absent
N/A
NSUI083
28
Absent
N/A
Absent
N/A
Absent
N/A
NSUI084
28
Absent
N/A
Absent
N/A
Absent
N/A
NSUI085
28
Present
1
Absent
N/A
Absent
N/A
NSUI086
28
Present
1
Absent
N/A
Absent
N/A
NSUI087
28
Absent
N/A
Absent
N/A
Absent
N/A
NSUI090
28
Absent
N/A
Absent
N/A
Absent
N/A
NSUI091
28
Absent
N/A
Present
1
Absent
N/A
NSUI095
28
Present
2
Absent
N/A
Absent
N/A
NSUI098
28
Absent
N/A
Absent
N/A
Absent
N/A
NSUI101
28
Absent
N/A
Absent
N/A
Absent
N/A
The majority of the genes are present, but some are missing or truncated. The suicin gene cluster is present in its entirety. The suicin gene cluster is completely absent. The majority of the genes are absent, but some are still present. N/A: not applicable.