Comparative Phenotype and Genome Analysis of Cellvibrio sp. PR1, a Xylanolytic and Agarolytic Bacterium from the Pearl River

Figure 4

Xylan and agarose metabolic pathways in strain PR1 proposed on the genome-wide analysis. Yellow color marked pathway is the pentose phosphate pathway; the number in parenthesis is the gene copy found in the genome; GalK: galactokinase (EC 2.7.1.6); GalE: UDP-glucose 4-epimerase (EC 5.1.3.2); GalT: UDP-glucose-hexose-1-phosphate uridylyltransferase (EC 2.7.7.12); GalU: UTP-glucose-1-phosphate uridylyltransferase (EC 2.7.7.9); PGM: phosphoglucomutase (EC 5.4.2.2); XI: xylose isomerase (EC 5.3.1.5); XK: xylulokinase (EC 2.7.1.17); AI: arabinose isomerase (EC 5.3.1.4); RK: ribulokinase (EC 2.7.1.16); RI: ribose 5-phosphate isomerase (EC 5.3.1.6); RPE: ribulose-phosphate 3-epimerase (EC 5.1.3.1); TKL: transketolase (EC 2.2.1.1); TAL: transaldolase (EC 2.2.1.2).