Genetic Analysis of Two Chicken Infectious Anemia Virus Variants-Related Gyrovirus in Stray Mice and Dogs: The First Report in China, 2015

Table 3

Transcription factor-binding sequence .

Motif	Consensus sequence	CIAV sequence	Numbers of sites
TATA box	GTATA(A/T)A(A/T)	TATATAT	1
CCAAT box	AGCCAAT	AGCCAAT	1
SP1 site	GGGCGG	GGGCGG	1
ATF site	ACGTCA	ACGTCA	5
CREB site	(T/G)(T/A)CGTCA	TACGTCA	4
Core element of the SV40 enhancer	GTGG(A/T)(A/T)(A/T)	GTGGTTA	1
Erythroid specific G-string	GGGGGGGGGG	GGGGGGGGGG	1
NFKB + H2TF1 sites	GGGGATTCCCC	GGGGATTCCCC	1
Lymphoid specific site	CTATTC	CTATTC	1
Pu Motif	9 purines	GAAAAGGGGGGGGGG	1
CACTAT	AT rich CACTAT	CACTAT	1
PEA-1 site	GGAAGTGACTAAC	GAAAGTGACTTTC	1
GT II site	G(G/C)TGTGGAA(A/T)GT	CGTTGCGAAAGT	1
MLTF	GGCCACGTGACC	TGCCACTGTCGA	1
CACCC site:	CACCC	CAGCC	2
		CATCC	2
Poly(A) signal	AATAAA	AATAAA	1

factors and consensus sequences of the binding sites are reviewed in references [29, 30].