“Positive Regulation of RNA Metabolic Process” Ontology Group Highly Regulated in Porcine Oocytes Matured In Vitro: A Microarray Approach
Table 2
Top five GO categories formed by differentially expressed genes.
Pathway ID
Pathway description
Count in gene set
False discovery rate
Biological process (GO)
GO:0042221
Response to chemical
8
GO:0051716
Cellular response to stimulus
9
GO:0016070
RNA metabolic process
7
GO:0007154
Cell communication
8
GO:0007165
Signal transduction
8
Molecular function (GO)
GO:0043565
Sequence-specific DNA binding
6
GO:0000981
RNA polymerase II transcription factor activity, sequence-specific DNA binding
5
GO:0001077
Transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding
4
GO:0003700
Transcription factor activity, sequence-specific DNA binding
5
GO:0000977
RNA polymerase II regulatory region sequence-specific DNA binding
4
Cellular component (GO)
GO:0005575
Cellular component
9
GO:0005634
Nucleus
6
GO:0005623
Cell
8
GO:0043231
Intracellular membrane-bounded organelle
7
GO:0031981
nuclear lumen
4
Top five GO categories formed by genes differentially expressed belonging to the “positive regulation of RNA metabolic process” ontology group. GO categories were generated in STRING software. GO ID (pathway ID), GO term description (pathway description), and number of the genes belonging to appropriate category (count in gene set) are shown.
