Research Article

Gene Expression Patterns Analysis in the Supraspinatus Muscle after a Rotator Cuff Tear in a Mouse Model

Table 2

The top 10 up- and downregulated genes after rotator cuff tear (at weeks 1 and 4).
(a)

Gene symbolGenbank accessionFold changeGene name

Upregulated

Krt18NM_010664217.799keratin 18

Sirpb1bNM_001173460150.129signal-regulatory protein beta 1B

Cd300lfNM_001169153128.186CD300 antigen like family member F

Ms4a4cNM_029499122.342membrane-spanning 4-domains, subfamily A, member 4C

Plekhh1NM_181073119.491pleckstrin homology domain containing, family H (with MyTH4 domain) member 1

Cd5lNM_009690104.575CD5 antigen-like

Krt8AK166854104.209keratin 8

Myh8AK08148295.091myosin, heavy polypeptide 8, skeletal muscle, perinatal

LOC102642410XM_00654450494.351tyrosine-protein phosphatase non-receptor type substrate 1-like

Myh3NM_00109963592.621myosin, heavy polypeptide 3, skeletal muscle, embryonic

Downregulated

Pitx1NM_0110970.025paired-like homeodomain transcription factor 1

Adam28NM_1833660.025a disintegrin and metallopeptidase domain 28

Rnf180NM_0279340.027ring finger protein 180

Gm5860NR_0406590.029predicted gene 5860

H2-M9NM_0082050.03histocompatibility 2, M region locus 9

Smco1NM_1832830.03single-pass membrane protein with coiled-coil domains 1

AU042410BB2096730.031expressed sequence AU042410

Kcnc1NM_0011127390.031potassium voltage gated channel, Shaw-related subfamily, member 1

8430426J06RikNR_0772290.032RIKEN cDNA 8430426J06 gene

Gm10822AK1448600.033predicted gene 10822

(b)

Gene symbolGenbank accessionFold changeGene name

Upregulated

Gm7325NM_00117747045.121predicted gene 7325

Plekhh1NM_18107342.051pleckstrin homology domain containing, family H (with MyTH4 domain) member 1

Ces2bNM_19817128.227carboxylesterase 2B

Ces2cNM_14560325.457carboxylesterase 2C

SlnNM_02554024.155sarcolipin

Krt18NM_01066422.114keratin 18

Myh3NM_00109963517.984myosin, heavy polypeptide 3, skeletal muscle, embryonic

Krt8AK16685416.550keratin 8

Zfp735NM_00112648915.836zinc finger protein 735

Epha1NM_02358015.534Eph receptor A1

Downregulated

Dok6NM_0010391730.063docking protein 6

Snhg11NM_1756920.072small nucleolar RNA host gene 11

Olfr981NM_1462860.087olfactory receptor 981

Pitx1NM_0110970.087paired-like homeodomain transcription factor 1

Gm12NM_0011955440.093predicted gene 12

Olfr586NM_1471110.098olfactory receptor 586

Samd11XR_8814290.101sterile alpha motif domain containing 11

Dnase1NM_0100610.111deoxyribonuclease I

1190003K10RikNM_0011954350.114RIKEN cDNA 1190003K10 gene

Gpr176NM_2013670.117G protein-coupled receptor 176