High Intraspecific Genetic Diversity of Nocardia brasiliensis, a Pathogen Responsible for Cutaneous Nocardiosis Found in France: Phylogenetic Relationships by Using sod and hsp65 Genes : Table 3

Table 3: DNA polymorphism of rrs, hsp65, and sodA genes from clinical N. brasiliensis strains isolated in France.


Nocardia species	Genes	Number of haplotypes (Hd, S², SD)	Number of of polymorphic sites

N. brasiliensis (: 36 clinical strains and 2 reference strains)	rrs (569)	16 (0.824, 0.00300, 0.055)	16
	hsp65 (401)	22 (0.927, 0.00087, 0.029)	27
	sodA (406)	14 (0.885, 0.00080, 0.028)	29

Resulting fragment size without the primers sequences; Hd: haplotype (gene) diversity, S²: variance of haplotype diversity, and SD: standard deviation of haplotype diversity.