Research Article
GAAP: A Genome Assembly + Annotation Pipeline
Table 15
An example of maker_opt.ctl in MAKER.
| #- - - - -Genome | genome=genome.fasta | #- - - - -EST Evidence | est=trinity.fasta | #- - - - -Protein Homology Evidence | protein=#protein sequence file in fasta format | #- - - - -Gene Prediction | snaphmm=similar_snap.hmm | augustus_species=similar_species |
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