Research Article
An Approach to Identify Individual Functional Single Nucleotide Polymorphisms and Isoform MicroRNAs
Table 1
The feature set of mature miRNA identification.
| | category | Mature miRNA(number) | MiRNA:miRNAduplex(number) | Pre-miRNA | Pri-miRNA | | (number) | (number) |
| | length | | | Distance to terminal loop( | |
| | minimum free energy | | MFE1( | | 9nt-MFE; 5nt-MFE; 3nt-MFE; +3nt-MFE; (4) |
| | Structural specificity | | (50) | | Left 9nt flank region(18); right 3nt flank region(6) |
| | Paired nucleotide | | Paired nucleotide(25) | | |
| | Number of “-” | 3-8nt; 9-12nt; -2-2nt; ( | | | |
| | Paired nucleotide | First nucleotide type(; First nucleotide paired(; Single nucleotide frequency(5) | | | |
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