Research Article

Integrated Analysis of lncRNA and mRNA Transcriptomes Reveals New Regulators of Ubiquitination and the Immune Response in Silica-Induced Pulmonary Fibrosis

Figure 1

Differentially expressed mRNAs and lncRNAs among 10 samples. (a) Unsupervised cluster analysis of included differentially expressed mRNAs. Red rectangles mean the clustered upregulated mRNAs, while green rectangles mean clustered downregulated mRNAs. (b) A volcano plot of these mRNAs based on p values and fold changes. Red dots mean the upregulated mRNAs, while green dots mean downregulated mRNAs. (c) Unsupervised cluster analysis of included differentially expressed lncRNAs. Red rectangles mean the clustered upregulated lncRNAs, while green rectangles mean clustered downregulated lncRNAs. (d) A volcano plot of these mRNAs based on p values and fold changes. Red dots mean the upregulated lncRNAs, while green dots mean downregulated lncRNAs. (e) Differential expression of lncRNAs was quantified using quantitative RT-PCR.
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