Research Article

Linking De Novo Assembly Results with Long DNA Reads Using the dnaasm-link Application

Table 1

The input set of long DNA reads and contigs characteristic for E. coli and S. cerevisiae organisms from Nanocorr’s research.

No. of sequences Sum [Mbp]N50 [bp] Max [bp] Avg. mis. Avg. indels Avg. N’s

contigsE. coli 65 4.681 176396 398301 2.32 0.17 0.00
S. cerevisiae 430 14.911 53444 257346 85.77 8.80 0.00

long readsE. coli 59009 240.098 7471 43798 180.75 181.20 0.00
S. cerevisiae 88218 526.589 9189 72879 360.98 171.80 5.06