Research Article
Network Analyses of Differentially Expressed Genes in Osteoarthritis to Identify Hub Genes
Table 2
The significantly enriched analysis of DEGs in osteoarthritis.
| Expression | Category | Term | Description | Gene Count | P Value |
| UP-DEGs | BP | GO:0006954 | inflammatory response | 19 | 1.21E-13 | BP | GO:0007267 | cell-cell signaling | 11 | 3.03E-07 | BP | GO:0070098 | chemokine-mediated signaling pathway | 6 | 2.07E-05 | BP | GO:0006935 | chemotaxis | 7 | 2.34E-05 | BP | GO:0006955 | immune response | 11 | 2.71E-05 | CC | GO:0005615 | extracellular space | 25 | 1.66E-09 | CC | GO:0005576 | extracellular region | 27 | 2.28E-09 | CC | GO:0005578 | proteinaceous extracellular matrix | 6 | 0.006499621 | CC | GO:0016323 | basolateral plasma membrane | 4 | 0.044790466 | CC | GO:0031988 | membrane-bounded vesicle | 2 | 0.05975494 | MF | GO:0008009 | chemokine activity | 5 | 6.54E-05 | MF | GO:0045236 | CXCR chemokine receptor binding | 3 | 6.87E-04 | MF | GO:0050786 | RAGE receptor binding | 3 | 0.001043791 | MF | GO:0005540 | hyaluronic acid binding | 3 | 0.004638666 | MF | GO:0005125 | cytokine activity | 5 | 0.007811921 |
| DOWN-DEGs | BP | GO:0006629 | lipid metabolic process | 5 | 0.001123386 | BP | GO:0050873 | brown fat cell differentiation | 3 | 0.003912643 | BP | GO:0010890 | positive regulation of sequestering of triglyceride | 2 | 0.020252031 | BP | GO:0010642 | negative regulation of platelet-derived | 2 | 0.020252031 | | | growth factor receptor signaling pathway | | | BP | GO:0042593 | glucose homeostasis | 3 | 0.035075126 | CC | GO:0005811 | lipid particle | 7 | 6.93E-08 | CC | GO:0005739 | mitochondrion | 11 | 0.009807547 | CC | GO:0070062 | extracellular exosome | 16 | 0.031369825 | CC | GO:0005576 | extracellular region | 11 | 0.032718894 | CC | GO:0005615 | extracellular space | 9 | 0.067564494 | MF | GO:0042803 | protein homodimerization activity | 7 | 0.016759119 | MF | GO:0008144 | drug binding | 3 | 0.01974095 |
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