Research Article
Its2vec: Fungal Species Identification Using Sequence Embedding and Random Forest Classification
Table 1
Taxonomic coverage of the ITS database established in this study.
| Taxonomy level | ITS subsets | Number of taxa | ITSset_2 | ITSset_3 | ITSset_4 | ITSset_5 | ITSset_6 | ITSset_7 | ITSset_8 | ITSset_9 | ITSset_10 |
| Phyla | 15 | 13 | 9 | 8 | 7 | 8 | 8 | 7 | 10 | 18 | Classes | 58 | 46 | 41 | 34 | 31 | 32 | 28 | 30 | 43 | 63 | Order | 165 | 142 | 128 | 106 | 97 | 98 | 78 | 78 | 133 | 187 | Family | 516 | 424 | 381 | 317 | 280 | 263 | 220 | 201 | 418 | 626 | Genus | 2073 | 1432 | 1116 | 875 | 693 | 633 | 497 | 404 | 1598 | 3385 | Species | 8586 | 4141 | 2503 | 1684 | 1236 | 929 | 701 | 566 | 5374 | 25720 | Sequences | 17172 | 12423 | 10012 | 8420 | 7416 | 6503 | 5608 | 5094 | 53740 | 126388 |
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