The Application of Mitochondrial COI Gene-Based Molecular Identification of Forensically Important Scuttle Flies (Diptera: Phoridae) in Korea

Table 2

List of COI gene sequences for Phoridae flies obtained in this study.

Haplogroup name	Sample name	Sequence coverage on COI	Length (nucleotide)	Location	GenBank; accession number	Reference
sca1	1-2, 1-3, 7-2, 10-3, 11-1, 12-1, 13-1, 13-2, 13-4, 14-1, 14-2, 14-3, 14-4, 15-4, 17-2, 17-3, 17-4, 19-2, 20-2	All	1,539 bp	South Korea	MT396274, MT396280, MT396287, MT296299, MT296304, MT396306, MT396320, MT396340-MT396343, MT396346, MT 396350-MT396351, MT396353-MT396354, MT396362-MT396364	Newly sequenced
sca2	3-3	All	1,539 bp	South Korea	MT396277	Newly sequenced
sca3	7-3, 8-1, 8-2, 8-4, 10-1, 10-4, 18-1, 18-2	All	1,539 bp	South Korea	MT396275-MT396276, MT396279, MT396290, MT396310, MT396313, MT396358-MT396359	Newly sequenced
sca4	1-1, 3-1, 3-2, 4-1, 4-2, 4-4, 5-3, 5-4, 11-2, 11-3, 11-4	All	1,539 bp	South Korea	MT396271-MT396272, MT396278, MT396282, MT396286, MT396291, MT396293, MT396295, MT396301, MT396307, MT396309	Newly sequenced
sca5	1-4, 2-1, 2-3, 2-4, 3-4, 4-3, 5-1, 7-4 8-3, 9-2, 10-2, 13-4, 15-1, 15-2, 15-3, 17-1, 19-1, 19-3, 19-4	All	1,539 bp	South Korea	MT396273, MT396292, MT396294, MT396298, MT396300, MT396302, MT396312, MT396314, MT396317-MT396319, MT396344-MT396345, MT396347, MT396349, MT396352, MT396361, MT396366-MT396367	Newly sequenced
sca6	2-2, 9-1, 9-3, 9-4, 12-2, 12-3, 12-4, 16-1, 16-2, 16-3, 16-4, 18-3, 18-4	All	1,539 bp	South Korea	MT396284-MT396285, MT396288, MT396303, MT396305, MT396308, MT396311, MT396348, MT396355-MT396357, MT396360, MT396365	Newly sequenced
Spi	5-2, 6-1, 6-2, 6-3, 6-4, 7-1, 20-1, 20-3	All	1,539 bp	South Korea	MT396281, MT396283, MT396289, MT396296, MT396297, MT 396315, MT396316, MT396321	Newly sequenced