Use Chou’s 5-Step Rule to Predict DNA-Binding Proteins with Evolutionary Information

Table 3

The performance of the method and other existing methods on the PDB1075 dataset via jackknife test evaluation.

Methods	ACC (%)	MCC	SN (%)	SP (%)
DNA-Prot	72.55	0.44	82.67	59.76
IDNA-Prot	75.40	0.50	83.81	64.73
IDNA-Prot|dis	77.30	0.54	79.40	75.27
PseDNA-Pro	76.55	0.53	79.61	73.63
DNA binder ()	73.58	0.47	66.47	80.36
DNA binder ()	73.95	0.48	68.57	79.09
IDNAPro-PseAAC	76.56	0.53	75.62	77.45
Kmer1+ACC	75.23	0.50	76.76	73.76
RF-based method	82.42	0.65	83.81	81.09
SVM-based method	86.05	0.72	85.14	86.91