BioMed Research International / 2020 / Article / Tab 1 / Research Article
Identification and Characterization of MAPK Signaling Pathway Genes and Associated lncRNAs in the Ileum of Piglets Infected by Clostridium perfringens Type C Table 1 List of 38 DEGs in the ileum of C. perfringens type C-infected piglets and involved in the MAPK signaling pathway.
Transcript_id Gene_id Gene_name Gene_location IR_FPKM IS_FPKM IC_FPKM IR/IS vs. IC ENSSSCT00000014692 ENSSSCG00000013448 MKNK2 chr2 43.4911 46.414 28.5315 Up ENSSSCT00000008273 ENSSSCG00000007541 PDGFA chr3 14.9183 14.7878 8.5737 Up ENSSSCT00000018048 ENSSSCG00000016578 FLNC chr18 10.0504 6.34368 2.87348 Up ENSSSCT00000010506 ENSSSCG00000009585 GADD45G chr14 7.62666 9.57734 3.91102 Up ENSSSCT00000035948 ENSSSCG00000000087 TAB1 chr5 16.5275 16.4673 6.57216 Up ENSSSCT00000011362 ENSSSCG00000010380 MAPK8 chr14 21.0525 21.908 12.6966 Up ENSSSCT00000006417 ENSSSCG00000005838 TRAF2 chr1 32.5992 41.5492 14.3483 Up ENSSSCT00000005604 ENSSSCG00000005084 PPM1A chr1 51.8059 43.5237 34.3071 Up ENSSSCT00000017223 ENSSSCG00000015815 FGFR1 chr15 3.73792 3.84521 1.81799 Up ENSSSCT00000036577 ENSSSCG00000014047 FGFR4 chr2 7.0379 7.28958 4.54589 Up ENSSSCT00000035592 ENSSSCG00000012825 IKBKG chrX 13.0762 13.1377 6.17629 Up ENSSSCT00000027163 ENSSSCG00000024182 TRADD GL896501.1 15.9912 18.1558 9.28888 Up ENSSSCT00000011849 ENSSSCG00000010831 DUSP10 chr10 7.38813 6.74121 13.1549 Down ENSSSCT00000006665 ENSSSCG00000006074 STK3 chr4 13.542 12.914 22.2968 Down ENSSSCT00000019500 ENSSSCG00000017918 ARRB2 chr12 19.7007 16.6525 33.5934 Down ENSSSCT00000011433 ENSSSCG00000010448 FAS chr14 11.263 8.86748 19.0862 Down ENSSSCT00000032467 ENSSSCG00000022284 DUSP6 GL894700.2 34.9735 42.5184 66.7146 Down ENSSSCT00000008863 ENSSSCG00000008090 IL1A chr3 0.997492 0.699335 2.9188 Down ENSSSCT00000028838 ENSSSCG00000025182 ELK4 chr9 29.0925 28.1354 68.2787 Down ENSSSCT00000010840 ENSSSCG00000009890 MAPKAPK5 chr14 18.5275 17.6704 31.6075 Down ENSSSCT00000015453 ENSSSCG00000014149 MEF2C chr2 37.5795 33.6784 73.2693 Down ENSSSCT00000002650 ENSSSCG00000002383 FOS chr7 9.18142 9.4395 18.8033 Down ENSSSCT00000012777 ENSSSCG00000011672 RASA2 chr13 15.7766 14.1345 27.9444 Down ENSSSCT00000006548 ENSSSCG00000005965 MYC chr4 28.3306 27.7612 44.6674 Down ENSSSCT00000019534 ENSSSCG00000017950 TP53 chr12 57.7784 56.1466 89.0769 Down ENSSSCT00000008861 ENSSSCG00000008088 IL1B1 chr3 0.556422 0.471694 3.69107 Down ENSSSCT00000014068 ENSSSCG00000012871 FGF19 chr2 3.07843 1.86141 10.3937 Down ENSSSCT00000005290 ENSSSCG00000004791 RASGRP1 chr1 30.1798 28.8263 51.557 Down ENSSSCT00000003320 ENSSSCG00000002989 AKT2 chr6 6.50241 8.61669 17.1493 Down ENSSSCT00000017958 ENSSSCG00000016494 BRAF chr18 13.8705 13.6419 26.888 Down ENSSSCT00000011540 ENSSSCG00000010548 CHUK chr14 14.6343 12.8828 25.4883 Down ENSSSCT00000012903 ENSSSCG00000011791 MAP3K13 chr13 3.88342 4.13007 6.05921 Down ENSSSCT00000011042 ENSSSCG00000010081 MAPK1 chr14 26.7106 17.6584 92.3744 Down ENSSSCT00000027425 ENSSSCG00000011743 MECOM chr13 3.93771 4.09804 7.1116 Down ENSSSCT00000035014 ENSSSCG00000014878 PAK1 chr9 24.4613 18.9034 46.5973 Down ENSSSCT00000035374 ENSSSCG00000010301 PPP3CB chr14 9.45583 7.1105 17.1076 Down ENSSSCT00000036028 ENSSSCG00000012163 RPS6KA3 chrX 9.17022 11.2079 19.51 Down ENSSSCT00000035439 ENSSSCG00000030957 NFKB1 chr8 168.162 48.412 278.469 Down