Research Article
Development of Microsatellite Markers for the Nipa Palm Hispid Beetle, Octodonta nipae (Maulik)
Table 2
Frequency of SSRs based on motif types in Octodonta nipae transcriptome.
| | SSR | Number of repeats | Total | Percentage | | SSR motif type | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | ≥12 |
| | A/T | — | — | — | — | — | — | — | — | 525 | 525 | 41.21 | | C/G | — | — | — | — | — | — | — | — | 30 | 30 | 2.35 | | AC/GT | — | — | 28 | 17 | 14 | 5 | 4 | 2 | | 70 | 5.49 | | AG/CT | — | — | 28 | 9 | 10 | 4 | 4 | 6 | | 61 | 4.79 | | AT/TA | — | — | 103 | 45 | 19 | 9 | 12 | 14 | | 202 | 15.86 | | AAC/GTT | — | 33 | 9 | 1 | 1 | — | — | — | | 44 | 3.45 | | AAG/CTT | — | 63 | 23 | 6 | 5 | — | — | — | | 97 | 7.61 | | AAT/ATT | — | 70 | 17 | 2 | 3 | — | — | — | | 92 | 7.22 | | ACC/GGT | — | 28 | 9 | 3 | — | — | — | — | | 40 | 3.14 | | ACG/CGT | — | 2 | 1 | 1 | — | — | — | — | | 4 | 0.31 | | ACT/AGT | — | 8 | 2 | 1 | 2 | — | — | — | | 13 | 1.02 | | AGC/CTG | — | 14 | 5 | 1 | — | — | — | — | | 20 | 1.57 | | AGG/CCT | — | 11 | 1 | — | — | — | — | — | | 12 | 0.94 | | ATC/ATG | — | 24 | 7 | — | — | — | — | — | | 31 | 2.43 | | CCG/CGG | — | 2 | 4 | — | — | — | — | — | | 6 | 0.47 | | AAAC/GTTT | — | 1 | — | — | — | — | — | — | | 1 | 0.08 | | AAAG/CTTT | — | 1 | — | — | — | — | — | — | | 1 | 0.08 | | AAAT/ATTT | — | 6 | — | — | — | — | — | — | | 6 | 0.47 | | AACC/GGTT | — | 3 | — | — | — | — | — | — | | 3 | 0.24 | | AAGT/ACTT | — | 1 | 1 | — | — | — | — | — | | 2 | 0.16 | | AATC/ATTG | — | 1 | — | — | — | — | — | — | | 1 | 0.08 | | ACTG/AGTC | — | — | 2 | — | — | — | — | — | | 2 | 0.16 | | AGAT/ATCT | — | 1 | — | — | — | — | — | — | | 1 | 0.08 | | AAAAT/ATTTT | 3 | — | — | — | — | — | — | — | | 3 | 0.24 | | AAACT/AGTTT | 1 | — | — | — | — | — | — | — | | 1 | 0.08 | | AACCT/AGGTT | 1 | — | — | — | — | — | — | — | | 1 | 0.08 | | AATGT/ACATT | 1 | — | — | — | — | — | — | — | | 1 | 0.08 | | AAATTC/AATTTG | 2 | — | — | — | — | — | — | — | | 2 | 0.16 | | AATGGG/ATTCCC | 1 | — | — | — | — | — | — | — | | 1 | 0.08 | | AGCGGC/CCGCTG | 1 | — | — | — | — | — | — | — | | 1 | 0.08 |
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