Analysis of the Complete Genomes of Enterovirus 71 Subtypes in China

Figure 3

Phylogenetic tree constructed with the VP1 nucleotide sequences (891 bp) of EV-A71 strains with the complete genome. Red branches indicate genotype C4 strains; blue branches indicate genotype B5 strains; orange branches indicate genotype B1 strains; light blue branches indicate genotype C1 strains; yellow branches indicate genotype C2 strains; pink branches indicate genotype B4 strains; brown branches indicate genotype A strains; purple branches indicate genotype C5 strains. Each strain was named according to the GenBank accession number. Taiwan’s strains have a TW suffix, reference strains have corresponding subtype name suffixes, and vaccine strains have the vaccine suffix.