Analysis of the Complete Genomes of Enterovirus 71 Subtypes in China

Table 3

Comparison of the nucleotide and amino acid identities of the Chinese EV-A71 strains.

	Sequence homology range (%)	Amino acid mutation site	Length of amino acid sequence	Rate of mutation (%)
VP4	76.8–100	34	69	49.3
VP2	77.9–100	108	254	42.5
VP3	77.9–100	67	242	27.7
VP1	80.9–100	116	297	39.1
2A	93.3–100	70	150	46.9
2B	69.3–100	51	99	51.5
2C	0.77–100	143	329	43.5
3A	71.7–100	50	86	58.1
3B	63.6–100	11	22	50
3C	69.3–100	91	183	49.7
3D	0.75–100	209	462	45.2
Coding regions	78.7–99.9	950	2193	43.3