SNP Selection in Genome-Wide Association Studies via Penalized Support Vector Machine with MAX Test

Table 4

List of SNPs selected commonly by three penalized methods.

RS ID	Genetic model	𝑃 value	RS ID	Genetic model	𝑃 value	RS ID	Genetic model	𝑃 value
rs3750551	D	0.000510	rs9289221	R	0.000160	rs6621316	A	0.000890
rs3886721	A	0.000040	rs16972014	A	0.000170	rs9890262	R	0.000210
rs2938451	A	0.000000	rs3013492	R	0.000760	rs6779769	A	0.000510
rs6429646	R	0.000050	rs7095688	A	0.000920	rs9502826	D	0.000690
rs6426870	R	0.000230	rs1439691	R	0.000100	rs9896683	R	0.000850
rs4784924	R	0.000100	rs7123207	R	0.000490	rs12907966	D	0.000220
rs8075266	R	0.000190	rs16830058	A	0.000830	rs5979009	D	0.000150
rs4851920	R	0.000130	rs10484180	R	0.000930	rs17157980	D	0.000730
rs9809817	R	0.000190	rs1952096	A	0.000250	rs2865510	R	0.000160
rs342735	A	0.000180	rs2842068	D	0.000600	rs12457620	D	0.000810
rs17066311	D	0.000790	rs420549	D	0.000440	rs4510937	R	0.000390
rs6627852	A	0.000470	rs16822723	A	0.000590	rs8073928	R	0.000510
rs11841074	D	0.000130	rs2492664	A	0.000270	rs10409991	R	0.000290
rs9447907	R	0.000650	rs2029866	R	0.000730	rs1871332	A	0.000150
rs16873423	D	0.000360	rs764515	A	0.000030	rs1264547	D	0.000670
rs315025	A	0.000390	rs11197596	A	0.000240	rs2016016	A	0.000360
rs2355615	A	0.000130	rs9344734	D	0.000690	rs6605081	R	0.000150