Uses of Phage Display in Agriculture: Sequence Analysis and Comparative Modeling of Late Embryogenesis Abundant Client Proteins Suggest Protein-Nucleic Acid Binding Functionality

Table 1

PDB templates used for each of the seven homology models of the LEA client proteins. The four-character PDB identifier is provided. The chain identifier follows the underscore. A brief description of each of the PDB template molecules is provided.

	PDB template	Description	𝑍-score
AT1G54870.1	3ijr_A (no publication)	Bacillus anthracis short chain dehydrogenase	−1.24
AT1G75830.1	1ayj_A [60]	Raphanus sativus antifungal protein 1	−0.27
AT3G55170.1	2zkr_v [61]	Mammalian ribosomal 60S subunit	−0.64
	4a17_U [62]	Tetrahymena thermophilia 60S ribosomal subunit
	3u5e_h [63]	Eukaryotic ribosome
	3iz5_c [64]	Triticum aestivum ribosomal protein
AT3G58680.1	3kxa_A [65]	Neisseria gonorrhoeae NGO0477	0.83
	2jvl_A [66]	Trichoderma reesei multiprotein bridging factor 1
AT5G18380.1	3u5c_Q [63]	Eukaryotic ribosome	0.02
AT5G44120.1	3kgl_A [67]	Brassica napus 11S globulin, procruciferin	−2.32
AT5G46430.2	4a17_X [62]	Tetrahymena thermophilia 60S ribosomal subunit	−0.77