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Computational and Mathematical Methods in Medicine
Volume 2014, Article ID 838259, 7 pages
Research Article

ProBLM Web Server: Protein and Membrane Placement and Orientation Package

1Department of Computer Science, Clemson University, Clemson, SC 29634, USA
2Computational Biophysics and Bioinformatics, Department of Physics, Clemson University, Clemson, SC 29634, USA

Received 8 April 2014; Revised 28 June 2014; Accepted 1 July 2014; Published 14 July 2014

Academic Editor: Andrzej Kloczkowski

Copyright © 2014 Taylor Kimmett et al. This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.

Supplementary Material

The Supplementary Material shows calculated pKa’s of ionizable groups of bacteriorhodopsin with explicit and implicit membrane. Available experimental data is provided as well. The calculations were done with Multiple Conformation Continuum Electrostatics (MCCE) package.

  1. Supplementary Table