Research Article

BioTCM-SE: A Semantic Search Engine for the Information Retrieval of Modern Biology and Traditional Chinese Medicine

Table 1

Major data sets that have been integrated in BioTCM-SE.

Graph Number of triples Size (MB)

http://www.biotcm.org/TCM_hierarchy 177,960 7.4
http://www.biotcm.org/TCM_classes 790 0.03
http://www.biotcm.org/TCM_broaderTransitive 975,478 21.9
http://www.biotcm.org/TCM_types 119,409 5.1
http://www.biotcm.org/TCM_labels 501,081 21.3
http://www.biotcm.org/TCM_associations 294,219 8.0
http://www.biotcm.org/TCM_properties 720 0.03
http://www.biotcm.org/TCM_main 902,413 41.3
http://www.biotcm.org/TCMGeneDit_TCMLS_mapping 461 0.02
http://www.biotcm.org/TCMGeneDit 111,939 21.9
http://www.biotcm.org/TCM_Diseasome_mapping 2,699 0.2
http://www.biotcm.org/diseasome 72,445 15
http://www.biotcm.org/drugbank 517,023 98.3
http://www.biotcm.org/sider 4,054,800 18.6
http://www.biotcm.org/cellmap 149,175 20
http://www.biotcm.org/LinkedCT 25,762,568 1,228.8
http://www.biotcm.org/dailymed 162,972 114.5
http://www.biotcm.org/Uniprot_GO_mapping 62,209,291 8,499.2
http://www.biotcm.org/Uniprot_gene_mapping 9,444,045 1,331.2
http://www.biotcm.org/Entrez_Gene 7,171,247 1228.8
http://www.biotcm.org/go 1,931,018 237.6
http://www.biotcm.org/gene2go 1,351,005 207.8
http://www.biotcm.org/BioGrid 1,961,200 1,738.8
http://www.biotcm.org/HPRD 2,699 271.8
http://www.biotcm.org/chebi 323,212 38.3
http://www.biotcm.org/Reactome 1,082,499 110.7