Pathway Interaction Network Analysis Identifies Dysregulated Pathways in Human Monocytes Infected by Listeria monocytogenes

Table 2

Dysregulated pathways identified from the pathway interaction network (PIN).

ID	Pathways	Gene number in pathway	DEG number in pathway
501	RNA polymerase II pretranscription events	34	17
185	Formation of HIV elongation complex in the absence of HIV tat	23	13
186	Formation of HIV-1 elongation complex containing HIV-1 tat	23	13
617	Transcription-coupled NER (TC-NER)	26	10
355	Negative epigenetic regulation of rRNA expression	28	13
144	DNA replication	44	24
503	RNA polymerase II transcription	51	23
340	mRNA splicing	48	14
341	mRNA splicing, major pathway	48	14