Iterative Variable Gene Discovery from Whole Genome Sequencing with a Bootstrapped Multiresolution Algorithm

Table 1

WGS data for the 16 primates included in this study.

Species	WGS and bio project no.	PubMed citation	Sequencing coverage	Contig N50
Lemuriformes
D. madagascariensis	AGTM00000000.1; PRJNA74997	22155688	Illumina GA IIx	3,653
O. garnettii	AAQR00000000.3; PRJNA16955	NP/DS	Illumina GA IIx	27,100
M. murinus	AAHY00000000.1; PRJNA11785	12040188	Celera	21,690
Tarsiiformes
T. syrichta	ABRT000000000.1; PRJNA20339	NP/DS	Sanger	38,165
New World monkeys
C. jacchus	ACFV00000000.1; PRJNA20401	NP/DS	ABI 3730	29,273
S. boliviensis	AGCE00000000.1; PRJNA67945	NP/DS	Illumina HiSeq	38,823
Old World monkeys
M. mulatta	AANU00000000.1; PRJNA12537	17431167	Sanger	25,707
M. fascicularis	CAEC00000000.1; PRJEA48347	21862625	454-FLXr; SOLiD	8,925
C. sabaeus	AQIB00000000.1; PRJNA168621	NP/DS	454 titanium; Illumina HiSeq; ABI	90,449
P. anubis	AHZZ00000000.1; PRJNA54005	NP/DS	Sanger: 454: 4.5; Illumina:	40,262
Hominids
N. leucogenys	ADFV00000000.1; PRJNA13975	NP/DS	Sanger	35,148
P. abelii	ABGA00000000.1; PRJNA20869	21270892	Sanger	15,648
G. gorilla	CABD00000000.2; PRJNA169344		Sanger
P. paniscus	AJFE00000000.1; PRJNA49285	22722832	454	66,775
P. troglodytes	AACZ00000000.3; PRJNA13184	16136131; 16136134	Sanger	50,656
H. sapiens	ABBA00000000.1; PRJNA19621	17803354	Sanger	108,431

NP: no publication; DS: direct submission.