Predicting Protein-Protein Interactions via Random Ferns with Evolutionary Matrix Representation

Table 4

Five-fold cross-validation results by using two models on the H. pylori dataset.

Classifier	Testing set	ACC (%)	PE (%)	SN (%)	MCC (%)	AUC (%)
SVM	1	82.85	81.72	83.45	71.57	89.26
	2	82.33	80.52	85.22	70.86	89.87
	3	79.42	76.17	82.25	67.25	86.20
	4	82.33	83.22	82.95	70.85	89.16
	5	83.53	84.75	83.06	72.47	90.22
	Average
RFs	1	85.76	79.30	95.77	75.19	94.16
	2	85.59	79.15	96.56	74.76	93.63
	3	85.59	79.27	94.20	75.11	94.28
	4	85.59	80.44	95.74	74.58	93.78
	5	84.22	78.17	96.35	72.43	94.78
	Average
Random Forest	Average
XGBoost	Average