Predicting Protein-Protein Interactions via Random Ferns with Evolutionary Matrix Representation

Table 6

The prediction ability of the different methods on the H. pylori PPI dataset.

Related work	Method	ACC (%)	SN (%)	PE (%)	MCC (%)
Martin et al.’s work [32]		83.40	79.90	85.70	N/A
You et al.’s work [53]		84.91	83.24	86.12	74.40
Nanni’s work [56]	WSR	83.70	79.00	87.00	N/A
Bock and Gough’s work [57]	Phylogenetic Booststrap	75.80	69.80	80.20	N/A
Nanni’s work [56]	LDC	83.00	80.60	85.10	N/A
Shi et al.’s work [58]	Boosting	79.52	80.37	81.69	70.64
Proposed method	MatFLDA_RFs	85.35	95.72	79.27	74.41

Note: N/A means not available.