Research Article

Integrated Modeling, Simulation, and Visualization for Nanomaterials

Table 1

Comparison with the existing systems.

ApproachesDomainsModelingSimulationVisualizationInteractive editing

OursCommon nanomaterialsModeling based on adjacency list, support rapid macromolecule reconstructionCalculation for surface energy items, integration of LAMMPSMultimode visualization based on HOOPSAdaptive model editing, maintaining physical meaning

Overvelde et al. [14]Porous materialsBuckling in 2D periodic, soft and porous structuresStress strain analysisSimple visualization

Materials Studio [15]Common nanomaterialsStructure modelingSimple property calculationIncompatibility problem

LAMMPS [16]Molecular dynamicsModeling macromoleculePowerful computing capability

RasMol [17]Nanomolecular modelModeling macromoleculePowerful and convenient display interface