Research Article
Hypergraph Regularized Discriminative Nonnegative Matrix Factorization on Sample Classification and Co-Differentially Expressed Gene Selection
Table 11
The FDR of different methods (INTA 1).
| Pathway | HDNMF | NMF | DNMF | LNMF | GNMF | GDNMF | HNMF |
| Ribosome | 7.75E-91 | 3.16E-86 | 1.41E-102 | 9.94E-91 | 4.28E-93 | 1.41E-102 | 9.94E-91 | Focal adhesion | 6.52E-38 | 4.44E-35 | 1.8E-36 | 7.7E-38 | 1.8E-36 | 1.8E-36 | 7.7E-38 | ECM-receptor interaction | 6.67E-36 | 1.91E-32 | 1.91E-32 | 4.01E-34 | 1.91E-32 | 1.91E-32 | 4.01E-34 | Pathogenic Escherichia coli infection | 8.01E-17 | 8.33E-17 | 1.92E-15 | 1.7E-15 | 1.92E-15 | 1.92E-15 | 4.91E-17 | Leukocyte transendothelial migration | 8.01E-17 | 8.33E-17 | 1.04E-16 | 1.08E-18 | 1.04E-16 | 1.04E-16 | 5.28E-18 |
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