Hypergraph Regularized Discriminative Nonnegative Matrix Factorization on Sample Classification and Co-Differentially Expressed Gene Selection

Table 8

NUM, TRS, and ARS of five methods (INTA 2).

Methods		HDNMF	NMF	DNMF	LNMF	GNMF	GDNMF	HNMF
PAAD	Num	326	326	330	321	321	325	319
	TRS	2177.31	2039.68	2164.29	2035.33	2037.44	1974.33	1945.6
	ARS	6.6789	6.2567	6.5585	6.3406	6.3472	6.0749	6.0991
ESCA	Num	263	265	269	261	263	269	253
	TRS	2383.93	2222.66	2274.52	2266.58	2170.57	2266.42	2298.05
	ARS	9.0644	8.3874	8.4555	8.6842	8.2531	8.4254	9.0832
HNSC	Num	245	248	247	240	247	248	242
	TRS	5217.77	4997	5065.33	5044.97	4954.63	5092.82	5117.22
	SRS	21.2970	20.1492	20.5074	21.0207	20.0592	20.5356	21.1455
COAD	Num	341	338	340	334	335	339	324
	TRS	2134.17	1995.88	2014.62	2027.45	1852.71	2010.03	1836.64
	ARS	6.2586	5.9050	5.9254	6.0702	5.5305	5.9293	5.6686
CHOL	Num	131	136	129	128	128	128	125
	TRS	505.85	493.98	455.1	466.04	424.14	464.75	402.63
	ARS	3.8615	3.6322	3.5280	3.6409	3.3136	3.6309	3.2210