Research Article

The Classification of Sini Decoction Pattern in Traditional Chinese Medicine by Gene Expression Profiling

Table 4

The complete list of all enriched GO terms for 192 biomarker genes (sorted according to value).

GO termDescription# gene value

GO:0006952Defense response240.000000
GO:0006955Immune response240.000002
GO:0019882Antigen processing and presentation70.000073
GO:0009617Response to bacterium110.000088
GO:0006968Cellular defense response70.000149
GO:0001817Regulation of cytokine production110.000172
GO:0048534Hemopoietic or lymphoid organ development130.000562
GO:0030097Hemopoiesis120.000999
GO:0002520Immune system development130.001183
GO:0002696Positive regulation of leukocyte activation80.001499
GO:0001819Positive regulation of cytokine production70.001573
GO:0050867Positive regulation of cell activation80.002053
GO:0007610Behavior140.004162
GO:0002763Positive regulation of myeloid leukocyte differentiation40.004167
GO:0006412Translation120.004210
GO:0002684Positive regulation of immune system process100.006451
GO:0006414Translational elongation70.006467
GO:0002822Regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains50.007075
GO:0048584Positive regulation of response to stimulus100.007697
GO:0001775Cell activation110.008090
GO:0051240Positive regulation of multicellular organism process100.008151
GO:0002819Regulation of adaptive immune response50.008161
GO:0030162Regulation of proteolysis50.008161
GO:0001818Negative regulation of cytokine production40.008578
GO:0002824Positive regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains40.008578
GO:0002544Chronic inflammatory response30.009217
GO:0010829Negative regulation of glucose transport30.009217
GO:0050832Defense response to fungus30.009217
GO:0051043Regulation of membrane protein ectodomain proteolysis30.009217
GO:0002694Regulation of leukocyte activation80.009343
GO:0002706Regulation of lymphocyte mediated immunity50.009351
GO:0019725Cellular homeostasis130.009574
GO:0002821Positive regulation of adaptive immune response40.010479
GO:0042742Defense response to bacterium50.010649
GO:0042592Homeostatic process180.011731
GO:0006873Cellular ion homeostasis110.012021
GO:0050865Regulation of cell activation80.012239
GO:0009611Response to wounding150.012528
GO:0007267Cell-cell signaling150.013447
GO:0050778Positive regulation of immune response70.013518
GO:0031640Killing of cells of another organism30.013542
GO:0055082Cellular chemical homeostasis110.013819
GO:0002705Positive regulation of leukocyte mediated immunity40.014959
GO:0002708Positive regulation of lymphocyte mediated immunity40.014959
GO:0010827Regulation of glucose transport40.014959
GO:0034101Erythrocyte homeostasis50.015220
GO:0030098Lymphocyte differentiation60.016523
GO:0051251Positive regulation of lymphocyte activation60.016523
GO:0050801Ion homeostasis110.017255
GO:0045639Positive regulation of myeloid cell differentiation40.017545
GO:0002703Regulation of leukocyte mediated immunity50.018862
GO:0006935Chemotaxis70.020473
GO:0042330Taxis70.020473
GO:0045765Regulation of angiogenesis50.020868
GO:0006954Inflammatory response100.021243
GO:0046649Lymphocyte activation80.024760
GO:0045321Leukocyte activation90.026088
GO:0002761Regulation of myeloid leukocyte differentiation40.026706
GO:0050870Positive regulation of T cell activation50.030175
GO:0048872Homeostasis of number of cells60.030221
GO:0009620Response to fungus30.030551
GO:0032655Regulation of interleukin-12 production30.030551
GO:0031349Positive regulation of defense response50.032829
GO:0002699Positive regulation of immune effectors process40.033982
GO:0032103Positive regulation of response to external stimulus50.035615
GO:0048878Chemical homeostasis120.036704
GO:0002504Antigen processing and presentation of peptide or polysaccharide antigen via MHC class II30.037413
GO:0016525Negative regulation of angiogenesis30.037413
GO:0050850Positive regulation of calcium-mediated signaling30.037413
GO:0006928Cell motion130.037784
GO:0006334Nucleosome assembly40.037967
GO:0031497Chromatin assembly40.037967
GO:0048002Antigen processing and presentation of peptide antigen30.044801
GO:0010033Response to organic substance180.044896
GO:0030218Erythrocyte differentiation40.046616
GO:0065004Protein-DNA complex assembly40.046616
GO:0002521Leukocyte differentiation60.046793
GO:0014070Response to organic cyclic substance60.049526
GO:0002237Response to molecule of bacterial origin50.051544
GO:0007626Locomotory behavior80.052288
GO:0055080Cation homeostasis80.052288
GO:0050848Regulation of calcium-mediated signaling30.052676
GO:0051249Regulation of lymphocyte activation60.055270
GO:0034728Nucleosome organization40.056149
GO:0045619Regulation of lymphocyte differentiation40.056149
GO:0002697Regulation of immune effectors process50.058846
GO:0002712Regulation of B cell mediated immunity30.060999
GO:0002889Regulation of immunoglobulin mediated immune response30.060999
GO:0051235Maintenance of location40.061237
GO:0032914Positive regulation of transforming growth factor-beta 1 production20.061881
GO:0045651Positive regulation of macrophage differentiation20.061881
GO:0007611Learning or memory50.062693
GO:0008285Negative regulation of cell proliferation100.063328
GO:0051241Negative regulation of multicellular organism process60.064581
GO:0051789Response to protein stimulus50.066670
GO:0016192Vesicle-mediated transport130.067653
GO:0042060Wound healing70.068209
GO:0001906Cell killing30.069736
GO:0046635Positive regulation of alpha-beta T cell activation30.069736
GO:0051094Positive regulation of developmental process90.072195
GO:0050863Regulation of T cell activation50.075009
GO:0050900Leukocyte migration40.077725
GO:0009895Negative regulation of catabolic process30.078852
GO:0046634Regulation of alpha-beta T cell activation30.078852
GO:0030099Myeloid cell differentiation50.079368
GO:0055066Di-, tri-valent inorganic cation homeostasis70.080251
GO:0006323DNA packaging40.083611
GO:0030217T cell differentiation40.083611
GO:0043066Negative regulation of apoptosis100.085435
GO:0046324Regulation of glucose import30.088316
GO:0002863Positive regulation of inflammatory response to antigenic stimulus20.091380
GO:0032891Negative regulation of organic acid transport20.091380
GO:0032908Regulation of transforming growth factor-beta 1 production20.091380
GO:0051918Negative regulation of fibrinolysis20.091380
GO:0043069Negative regulation of programmed cell death100.092873
GO:0060548Negative regulation of cell death100.095435
GO:0045637Regulation of myeloid cell differentiation40.095934
GO:0030003Cellular cation homeostasis70.096877
GO:0045582Positive regulation of T cell differentiation30.098097