Condition-Specific Molecular Network Analysis Revealed That Flagellar Proteins Are Involved in Electron Transfer Processes of Shewanella piezotolerans WP3

Table 3

The most representative KEGG pathway that was enriched in the modules identified from the heat shock condition.

Cluster	Size	Density	value	KEGG pathways	Members
1	15	0.67	2.85E − 05	Pyruvate metabolism	swp_1380, swp_5027, swp_4752, swp_4333, swp_3528, swp_2388, swp_2216, swp_2215, swp_2213, swp_2053, swp_1378, swp_1379, swp_4077, swp_0481, swp_0360
2	12	0.56	1.56E − 04	Ribosome	swp_2008, swp_2030, swp_4802, swp_3049, swp_2027, swp_2028, swp_2025, swp_2007, swp_0208, swp_1998, swp_0427, swp_1556
3	9	0.64	2.84E − 04	Peptidoglycan biosynthesis	swp_2592, swp_2234, swp_3922, swp_2293, swp_2225, swp_4399, swp_2229, swp_2228, swp_2224
4	6	1.00	6.31E − 04	Flagellar assembly	swp_1499, swp_5085, swp_5084, swp_5083, swp_5082, swp_1519
5	7	0.62	7.64E − 04	Beta-lactam resistance	swp_1046, swp_4921, swp_4710, swp_2733, swp_1301, swp_1300, swp_2423
6	6	0.73	1.28E − 03	Na^+-translocating NADH-quinone reductase	swp_1172, swp_2888, swp_2886, swp_2884, swp_1173, swp_2883
7	7	0.62	1.94E − 03	Multihaem cytochrome	swp_4806, swp_2182, swp_4116, swp_2918, swp_2183, swp_3403, swp_0613
8	8	0.64	2.70E − 03	Lipopolysaccharide biosynthesis	swp_3507, swp_3506, swp_0834, swp_3511, swp_3509, swp_3508, swp_3516, swp_3515
9	5	0.70	2.79E − 03	—	swp_3204, swp_3981, swp_0083, swp_3979, swp_1828
10	4	0.67	1.01E − 02	—	swp_2103, swp_3188, swp_3190, swp_3192
11	5	0.70	1.71E − 02	Glycerophospholipid metabolism	swp_0081, swp_5056, swp_4820, swp_4318, swp_0775
12	5	0.60	2.91E − 02	Bacterial secretion system	swp_0196, swp_0739, swp_0187, swp_0189, swp_0188
13	4	0.67	3.34E − 02	—	swp_3543, swp_4396, swp_0518, swp_0110

Note: the bold enrichment terms indicate that there was no KEGG enrichment and InterPro enrichment was used alternatively; — indicate that the enrichment analysis returned with no results.