Molecular Diversity of Sapovirus Infection in Outpatients Living in Nanjing, China (2011–2013)

Figure 3

Conserved or variable sites of HSVs and Nanjing strains. The boxes were the conserved sites longer than two amino acids; some were conserved for all HSVs, including “VFEMEG,” “ATG,” “NPYT,” and “AGWGG”; others were conserved sites for genotype GI, including “IQSN,” “RTFAWNDRMP,” and “SLHPNI.” Colors were marked for the variable sites between 10 and 30 amino acids. GI, GII, GVI, and GV were genogroups, and GI.1, GI.2, GI.3, and GI.5 were genotypes.