International Journal of Evolutionary Biology

Research Article

Elucidating the Evolutionary Relationships among Bos taurus Digestive Organs Using Unigene Expression Data

Table 1

General information about the amount and annotation levels of Unigene data used in the expression analysis of Bos taurus, Homo sapiens, and Mus musculus. All selected body sites for the three species are included.
Body SitePercentage of EntriesPercentage of EntriesMean Expression
Number of EntriesExpressed in BodyExpressed in Body Site with Level in Pseudo
Expressed in Body SiteSite with EntrezSequence Similaritytranscripts per
Gene IdentifiersAnnotations to H. sapiens Million (TPM)
Stomach (Hs)1504574.79678.00666.46725
Stomach (Mm) 800877.73477.535124.8751
Abomasum638177.24581.147156.7153
Omasum127581.09882.902784.314
Reticulum349686.64289.159286.0413
Rumen534083.95186.404187.2574
Intestine (Bt)1219776.66680.74981.98734
Intestine (Hs) 2391461.99366.58941.8165
Intestine (Mm) 1242982.37281.65680.45698
Blood (Bt)195684.04987.474511.2477
Blood (Hs)1616972.26875.84961.846674
Blood (Mm)616888.65188.700162.1272
Brain (Bt)1972462.41167.35450.69966
Brain (Hs)3993447.86452.91725.04132
Brain (Mm)2860561.32856.77735.63157
Muscle (Bt)950679.96084.957105.1967
Muscle (Hs)1717672.43875.21558.22079
Muscle (Mm)689190.00189.755145.1169
Skin (Bt)931381.75785.912107.3768
Skin (Hs)1778473.62877.50256.23032
Skin (Mm)1531680.62877.43565.2912
Kidney (Bt)1073478.42482.40293.16073
Kidney (Hs)2566059.72762.92738.97116
Kidney (Mm)1411382.50581.10370.85666
Liver (Bt)1152068.94170.92086.80554
Liver (Hs)1992167.19070.81550.19828
Liver (Mm)1238185.41385.14780.76893
Ovary (Bt)982277.44982.040101.8123
Ovary (Hs)1706769.96573.55158.5926
Ovary (Mm)1133283.55181.98988.24569
Spleen (Bt)401581.44484.209249.0659
Spleen (Hs)1051381.85184.19195.12036
Spleen (Mm)1401579.07975.34171.35211