Table of Contents
International Journal of Evolutionary Biology
Volume 2012 (2012), Article ID 780169, 12 pages
http://dx.doi.org/10.1155/2012/780169
Research Article

Phylogeographic Diversity of the Lower Central American Cichlid Andinoacara coeruleopunctatus (Cichlidae)

1Biology Department, Wheaton College, 26 East Main Street, Norton, MA 02766, USA
2Department of Ecology and Evolutionary Biology, University of Colorado, Boulder, CO 80309-0334, USA
3Smithsonian Tropical Research Institute, P.O. Box 2072, Balboa, Panama

Received 15 February 2012; Accepted 29 June 2012

Academic Editor: R. Craig Albertson

Copyright © 2012 S. Shawn McCafferty et al. This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.

Supplementary Material

The Supplementary Information file contains tables providing (1) the designation of rivers and drainages into biogeographic provinces (Table S1.1), (2) Genbank accession numbers associated with each sample (pending; Table S1.2), and (3) ATP6/8 haplotype frequencies by river, drainage, and biogeographic region. In addition, the Supplement also provides greater details on (1) choosing the best evolutionary model to use in analyzing the ATP6/8 data set (S1A: Results of jModelTest), (2) additional phylogenetic analyses that were used other than those detailed in the text (S1B: Additional phylogenetic analyses), (3) the resulting phylogeny when an additional 1042bp of ND2 sequence is included with a subset of the ATP6/8 data set (S1C: Additional sequences from ND2 and analyses of the combined datasets), (4) the results for comparison of various migration models using Bayes factors (S1D: Results using Migrate-N), and (5) the results of tests for substitution saturation effects (S1F: Test of saturation ATP6/8).

  1. Supplementary Material