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Comparative and Functional Genomics
Volume 4 (2003), Issue 1, Pages 121-126
Building a Cell and Anatomy Ontology of Caenorhabditis elegans
WormBase, 156-29 California Institute of Technology, Pasadena, CA 91125, USA
Received 11 November 2002; Accepted 2 December 2002
Copyright © 2003 Hindawi Publishing Corporation. This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
Citations to this Article [18 citations]
The following is the list of published articles that have cited the current article.
- Midori A. Harris, and Helen Parkinson, “Standards and Ontologies for Functional Genomics: Towards Unified Ontologies for Biology and Biomedicine,” Comparative and Functional Genomics, vol. 4, no. 1, pp. 116–120, 2003.
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- Marcus R. Munafo, Binnaz Yalcin, Saffron A. Willis-Owen, and Jonathan Flint, “Association of the dopamine D4 receptor (DRD4) gene and approach-related personality traits: Meta-analysis and new data,” Biological Psychiatry, vol. 63, no. 2, pp. 197–206, 2008.
- David P. Hill, Tanya Z. Berardini, Douglas G. Howe, and Kimberly M. Van Auken, “Representing ontogeny through ontology: A developmental biologist's guide to the gene ontology,” Molecular Reproduction and Development, 2009.
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- R. Hoehndorf, P. N. Schofield, and G. V. Gkoutos, “PhenomeNET: a whole-phenome approach to disease gene discovery,” Nucleic Acids Research, vol. 39, no. 18, pp. e119–e119, 2011.
- R. Hoehndorf, M. Dumontier, and G. V. Gkoutos, “Evaluation of research in biomedical ontologies,” Briefings in Bioinformatics, 2012.
- Bernard de Bono, Pierre Grenon, and Stephen John Sammut, “ApiNATOMY: A novel toolkit for visualizing multiscale anatomy schematics with phenotype-related information,” Human Mutation, vol. 33, no. 5, pp. 837–848, 2012.
- K. Van Auken, P. Fey, T. Z. Berardini, R. Dodson, L. Cooper, D. Li, J. Chan, Y. Li, S. Basu, H.-M. Muller, R. Chisholm, E. Huala, and P. W. Sternberg, “Text mining in the biocuration workflow: applications for literature curation at WormBase, dictyBase and TAIR,” Database, vol. 2012, no. 0, pp. bas040–bas040, 2012.
- V. S. Malladi, D. T. Erickson, N. R. Podduturi, L. D. Rowe, E. T. Chan, J. M. Davidson, B. C. Hitz, M. Ho, B. T. Lee, S. Miyasato, G. R. Roe, M. Simison, C. A. Sloan, J. S. Strattan, F. Tanaka, W. J. Kent, J. M. Cherry, and E. L. Hong, “Ontology application and use at the ENCODE DCC,” Database, vol. 2015, no. 0, pp. bav010–bav010, 2015.
- P. Davis, J. Done, T. Down, S. Gao, C. Grove, T. W. Harris, R. Kishore, R. Lee, J. Lomax, Y. Li, H.-M. Muller, C. Nakamura, P. Nuin, M. Paulini, D. Raciti, G. Schindelman, E. Stanley, M. A. Tuli, K. Van Auken, D. Wang, X. Wang, G. Williams, A. Wright, K. Yook, M. Berriman, P. Kersey, T. Schedl, L. Stein, P. W. Sternberg, K. L. Howe, B. J. Bolt, S. Cain, J. Chan, and W. J. Chen, “WormBase 2016: expanding to enable helminth genomic research,” Nucleic Acids Research, 2015.
- David Angeles-Albores, Raymond Y. N. Lee, Juancarlos Chan, and Paul W. Sternberg, “Tissue enrichment analysis for C. elegans genomics,” BMC Bioinformatics, vol. 17, no. 1, 2016.
- Melissa D. Clarkson, “Representation of anatomy in online atlases and databases: a survey and collection of patterns for interface design,” BMC Developmental Biology, vol. 16, no. 1, 2016.
- Joshua Burdick, Travis Walton, Elicia Preston, Amanda Zacharias, Arjun Raj, and John Isaac Murray, “Overlapping cell population expression profiling and regulatory inference in C. elegans,” BMC Genomics, vol. 17, no. 1, 2016.