International Journal of Genomics

International Journal of Genomics / 2005 / Article

Research article | Open Access

Volume 6 |Article ID 373740 | https://doi.org/10.1002/cfg.496

Pankaj Jaiswal, Shulamit Avraham, Katica Ilic, Elizabeth A. Kellogg, Susan McCouch, Anuradha Pujar, Leonore Reiser, Seung Y. Rhee, Martin M. Sachs, Mary Schaeffer, Lincoln Stein, Peter Stevens, Leszek Vincent, Doreen Ware, Felipe Zapata, "Plant Ontology (PO): a Controlled Vocabulary of Plant Structures and Growth Stages", International Journal of Genomics, vol. 6, Article ID 373740, 10 pages, 2005. https://doi.org/10.1002/cfg.496

Plant Ontology (PO): a Controlled Vocabulary of Plant Structures and Growth Stages

Received19 Sep 2005
Revised21 Oct 2005
Accepted07 Nov 2005

Abstract

The Plant Ontology Consortium (POC) (www.plantontology.org) is a collaborative effort among several plant databases and experts in plant systematics, botany and genomics. A primary goal of the POC is to develop simple yet robust and extensible controlled vocabularies that accurately reflect the biology of plant structures and developmental stages. These provide a network of vocabularies linked by relationships (ontology) to facilitate queries that cut across datasets within a database or between multiple databases. The current version of the ontology integrates diverse vocabularies used to describe Arabidopsis, maize and rice (Oryza sp.) anatomy, morphology and growth stages. Using the ontology browser, over 3500 gene annotations from three species-specific databases, The Arabidopsis Information Resource (TAIR) for Arabidopsis, Gramene for rice and MaizeGDB for maize, can now be queried and retrieved.

Copyright © 2005 Hindawi Publishing Corporation. This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.


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