International Journal of Genomics / 2009 / Article / Tab 2

Research Article

Aberrant Expression of Critical Genes during Secondary Cell Wall Biogenesis in a Cotton Mutant, Ligon Lintless-1 ( -1)

Table 2

Representation of genes which are significantly upregulated or downregulated by a factor of 2X in 24 dpa -1 cotton fiber relative to wild-type TM-1 fiber. (Genes with unknown function or no sequence homology are omitted.).

GenBankDescriptionRegulationFold ChangeFunctional Category

U73588SuSy IsoformUp8.8Cytoskeleton
AF336286GhMYB36Up6.1Cytoskeleton
AF336286GaMYB38Down7.7Cytoskeleton
DQ13871Sucrose transport proteinDown4.7Cytoskeleton
AB022091Sucrose Synthase-2Down4.1Cytoskeleton
AL391142Gamma Tubulin ComponentDown3.1Cytoskeleton
AF521250Alpha TubulinDown2.5Cytoskeleton
AY054693Beta Tubulin-9Down2.4Cytoskeleton
EU375992GhTub Beta tubulin 2Down2.1Cytoskeleton
NP177112EXPA1Up6.2Cell Structure/Organization
DQ02352Expansin-related geneDown5.3Cell Structure/Organization
AF043284ExpansinDown4.1Cell Structure/Organization
AC152751Putative Kinesin Light ChainDown3.7Cell Structure/Organization
NM_00106CesA7Down2.5Cell Structure/Organization
AY088211Anthocyanidin transferaseUp5.7Stress Response
AF336284Anthocyanin Regulatory ProteinUp5.6Stress Response
AY27540FlavonoidUp4.8Stress Response
AY78110Ethylene Transcription FactorDown5.9Signaling
NM1024Calmodulin-related proteinDown2.7Signaling

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