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Comparative and Functional Genomics
Volume 2012, Article ID 569731, 12 pages
Research Article

Interactome of Radiation-Induced microRNA-Predicted Target Genes

Department of Medical Laboratory and Radiation Sciences, University of Vermont, 302 Rowell Building, Burlington, VT 05405, USA

Received 26 March 2012; Accepted 19 April 2012

Academic Editor: Giulia Piaggio

Copyright © 2012 Tenzin W. Lhakhang and M. Ahmad Chaudhry. This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.

Citations to this Article [14 citations]

The following is the list of published articles that have cited the current article.

  • M. Ahmad Ahmad Chaudhry, “Expression pattern of small nucleolar RNA host genes and long non-coding RNA in X-rays-treated lymphoblastoid cells,” International Journal of Molecular Sciences, vol. 14, no. 5, pp. 9099–9110, 2013. View at Publisher · View at Google Scholar
  • M. A. Chaudhry, R. A. Omaruddin, C. D. Brumbaugh, M. A. Tariq, and N. Pourmand, “Identification of radiation-induced microRNA transcriptome by next-generation massively parallel sequencing,” Journal of Radiation Research, 2013. View at Publisher · View at Google Scholar
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  • Laura Ann Jacobs, Findlay Bewicke-Copley, Mark Graham Poolman, Ryan Charles Pink, Laura Ann Mulcahy, Isabel Baker, Ellie-May Beaman, Travis Brooks, Daniel Paul Caley, William Cowling, James Michael Stevenson Currie, Jessica Horsburgh, Lottie Kenehan, Emma Keyes, Daniel Leite, Davide Massa, Adam McDermott-Rouse, Priya Samuel, Hannah Wood, Munira Kadhim, and David Raul Francisco Carter, “Meta-Analysis Using a Novel Database, miRStress, Reveals miRNAs That Are Frequently Associated with the Radiation and Hypoxia Stress-Responses,” Plos One, vol. 8, no. 11, 2013. View at Publisher · View at Google Scholar
  • M. Ahmad Chaudhry, “Radiation-induced microRNA: Discovery, functional analysis, and cancer radiotherapy,” Journal of Cellular Biochemistry, 2013. View at Publisher · View at Google Scholar
  • Lucian Beer, Rudolf Seemann, Robin Ristl, Adolf Ellinger, Mohammad Mahdi Kasiri, Andreas Mitterbauer, Matthias Zimmermann, Christian Gabriel, Mariann Gyoengyoesi, Walter Klepetko, Michael Mildner, and Hendrik Jan Ankersmit, “High dose ionizing radiation regulates micro RNA and gene expression changes in human peripheral blood mononuclear cells,” Bmc Genomics, vol. 15, 2014. View at Publisher · View at Google Scholar
  • M. Ahmad Chaudhry, “Small Nucleolar RNA Host Genes and Long Non-Coding RNA Responses in Directly Irradiated and Bystander Cells,” Cancer Biotherapy & Radiopharmaceuticals, pp. 140206070512000, 2014. View at Publisher · View at Google Scholar
  • Aminul Islam, Svetlana Ghimbovschi, Min Zhai, and Joshua M. Swift, “An Exploration of Molecular Correlates Relevant to Radiation Combined Skin-Burn Trauma,” Plos One, vol. 10, no. 8, 2015. View at Publisher · View at Google Scholar
  • Yoko Tabe, Yasuhito Hatanaka, Mayumi Nakashiro, Kazumasa Sekihara, Shinichi Yamamoto, Hiromichi Matsushita, Saiko Kazuno, Tsutomu Fujimura, Takako Ikegami, Keita Nakanaga, Hirotaka Matsumoto, Takashi Ueno, Junken Aoki, Takehiko Yokomizo, Marina Konopleva, Michael Andreeff, Takashi Miida, Kazuhisa Iwabuchi, and Keisuke Sasai, “Integrative genomic and proteomic analyses identifies glycerol-3-phosphate acyltransferase as a target of low-dose ionizing radiation in EBV infected-B cells,” International Journal of Radiation Biology, pp. 1–11, 2015. View at Publisher · View at Google Scholar
  • Abraham Pedroza-Torres, Jorge Fernández-Retana, Oscar Peralta-Zaragoza, Nadia Jacobo-Herrera, David Cantú de Leon, Jorge F. Cerna-Cortés, Cesar Lopez-Camarillo, and Carlos Pérez-Plasencia, “A microRNA expression signature for clinical response in locally advanced cervical cancer,” Gynecologic Oncology, 2016. View at Publisher · View at Google Scholar
  • Kim, Kim, Chung, and Go, “Characterization of microRNAs and their target genes associated with transcriptomic changes in gamma-irradiated Arabidopsis,” Genetics and Molecular Research, vol. 15, no. 3, 2016. View at Publisher · View at Google Scholar
  • Adrienne E. G. Williams, Kevin Choi, Annie L. Chan, Yun Jong Lee, Westley H. Reeves, Michael R. Bubb, Carol M. Stewart, and Seunghee Cha, “Sjögren’s syndrome-associated microRNAs in CD14+ monocytes unveils targeted TGFβ signaling,” Arthritis Research & Therapy, vol. 18, no. 1, 2016. View at Publisher · View at Google Scholar
  • Saurav Mallik, and Zhongming Zhao, “Towards integrated oncogenic marker recognition through mutual information-based statistically significant feature extraction: an association rule mining based study on cancer expression and methylation profiles,” Quantitative Biology, 2017. View at Publisher · View at Google Scholar
  • Yue-Ting Tang, Yi-Yao Huang, Jing-Huan Li, Si-Hua Qin, Yong Xu, Tai-Xue An, Chun-Chen Liu, Qian Wang, and Lei Zheng, “Alterations in exosomal miRNA profile upon epithelial-mesenchymal transition in human lung cancer cell lines,” BMC Genomics, vol. 19, no. 1, 2018. View at Publisher · View at Google Scholar