|
| GSE accession | Number of contrasts | Study title |
|
| GSE10019 | 2 | Identification of RGA downstream genes by using steroid-inducible system |
| GSE10247 | 1 | Transcriptome analysis of the Arabidopsis phloem |
| GSE10323 | 1 | Testing Arabidopsis for the presence of arbuscular mycorrhizal signalling pathways |
| GSE10496 | 1 | Expression analysis of the effect of protoplasting and FACS sorting in roots exposed to iron deficiency (-Fe) |
| GSE10497 | 4 | Expression analysis of root developmental zones after iron deficiency (-Fe) treatment |
| GSE10502 | 6 | Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis roots |
| GSE10509 | 4 | EXECUTER1- and EXECUTER2-dependent transfer of stress signals from the plastid to the nucleus of Arabidopsis thaliana |
| GSE10522 | 10 | Expression data of Arabidopsis thaliana rosettes during chilling |
| GSE10568 | 2 | camta3 mutant versus wild-type microarray analysis |
| GSE10646 | 4 | BTH treated mkk1, mkk2, and mkk1/2 knockout mutant |
| GSE10670 | 4 | Global expression profiling of wild-type and transgenic Arabidopsis plants in response to water stress |
| GSE10719 | 1 | Response of Arabidopsis cell culture to phytoprostane A1 |
| GSE10732 | 4 | Identification of TGA-regulated genes in response to phytoprostane A1 and OPDA |
| GSE10749 | 5 | Response of Arabidopsis cell culture to cyclopentenone oxylipins |
| GSE10812 | 3 | Expression data from thylakoidal ascorbate peroxidase overexpressor Arabidopsis thaliana (Col) rosette leaves |
| GSE10928 | 1 | Arabidopsis wild-type versus vip3 |
| GSE11119 | 1 | SOL2 mutation affect gene expression at root apex |
| GSE11216 | 2 | Brassinazole treatment of arf2 and wild-type dark-grown seedlings |
| GSE11558 | 5 | transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants |
| GSE11594 | 1 | Expression data from dark-grown Arabidopsis wild-type (Wt, col-o) and pif1-2 (At2g20810, Salk_072677) mutant seedlings |
| GSE11852 | 2 | Effect of uniconazole on wt and pkl mutant germinating seeds |
| GSE12029 | 1 | NFYA5, a CCAAT binding transcription factor important for drought resistance in Arabidopsis |
| GSE12137 | 1 | LEAFY COTYLEDON1 is a key regulator of fatty acid biosynthesis in Arabidopsis thaliana |
| GSE12401 | 1 | Transcript abundance data from seedlings of wild-type Ws and ged1 (greening after extended darkness 1) mutant |
| GSE12402 | 6 | Expression data from Arabidopsis seed compartments at the preglobular stage |
| GSE3865 | 1 | CSN4-1 mutant analysis |
| GSE3959 | 3 | RNA changes induced by LEAFY COTYLEDON2 activity in Arabidopsis seedlings |
| GSE4113 | 3 | Arabidopsis plants with altered levels of alternative oxidase |
| GSE4662 | 1 | STA1, a stress-upregulated nuclear protein, is required for pre-mRNA splicing, mRNA turnover, and stress tolerance |
| GSE4733 | 8 | Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling |
| GSE5465 | 2 | Gene expression in wild-type and transgenic plants overexpressing rice topoisomerase6 genes |
| GSE5525 | 5 | Transcriptome changes of Arabidopsis during pathogen and insect attack |
| GSE5526 | 3 | Transcriptional programs of early reproductive stages in Arabidopsis |
| GSE5533 | 3 | Tissue type arrays of Columbia-0 |
| GSE5534 | 3 | Response to cold, plate-grown plants |
| GSE5535 | 3 | Response to cold, soil-grown plants |
| GSE5536 | 1 | Response to CBF2 expression |
| GSE5611 | 1 | Differential gene expression patterns in the phosphate-deficient mutant, pho 1 |
| GSE5620 | 16 | AtGenExpress: stress treatments (control plants) |
| GSE5641 | 1 | Peroxisomal mdh mutant |
| GSE5699 | 1 | AtGenExpress: ARR21C overexpression |
| GSE5710 | 1 | Dark-induced gene expression in sfr6 |
| GSE5712 | 1 | Transcriptome analysis of ARRESTED DEVELOPMENT 3 mutant. |
| GSE5726 | 2 | Seedling transcriptome affected by Norflurazon-induced photobleaching of chloroplasts |
| GSE5735 | 1 | Identification of core genes regulating plant programmed cell death (PCD) |
| GSE5806 | 2 | Identification of differentially expressed genes in brm-101 and syd-2 mutants |
| GSE6024 | 2 | eif3h/WT polysome loading |
| GSE6025 | 1 | eif3h/WT transcript level |
| GSE6151 | 9 | The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis |
| GSE6161 | 3 | Differential gene expression patterns in Arabidopsis mutants lacking the K+ channels, akt1, cngc1, and cngc4. |
| GSE6166 | 1 | Genes affected by hog1 alleviation of CHS silencing |
| GSE6583 | 2 | Genomewide transcriptome analysis of Arabidopsis and siz1-3 response to drought stress |
| GSE6638 | 4 | Expression data of germinating ahg1, ahg3, and WT seedling in the presence of ABA |
| GSE6696 | 2 | Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis |
| GSE6788 | 1 | Expression data of an albino mutant DS 13–2198-1 |
| GSE6812 | 1 | Gene expression in wild-type and transgenic plants overexpressing rice OsTOP6A1 gene |
| GSE6826 | 2 | Identification of candidate Arabidillo target genes in Arabidopsis |
| GSE6827 | 1 | Comparison of transcriptional profiles between sni1 and wild type |
| GSE6906 | 2 | Rhythmic growth explained by coincidence between internal and external cues |
| GSE6954 | 2 | Identification of AGL24 downstream genes by using XVE inducible system |
| GSE7003 | 1 | Experiment to identify downstream targets of Arabidopsis REVOLUTA (HDZIPIII) transcription factor. |
| GSE7227 | 3 | microRNA160-resistant AUXIN RESPONSE FACTOR10 (mARF10) germinating seeds |
| GSE7334 | 1 | Microarray analysis of Arabidopsis genome Response to aluminum stress |
| GSE7353 | 2 | Early GA response genes in Arabidopsis thaliana |
| GSE7432 | 4 | Ethylene and auxin interactions in the roots of Arabidopsis seedlings |
| GSE7636 | 1 | Expression analysis of the effect of protoplasting and FACS sorting in roots |
| GSE7639 | 3 | Expression analysis of root developmental zones after treatment with salt |
| GSE7641 | 6 | Expression analysis of root cell types after treatment with salt |
| GSE7642 | 5 | Time course expression analysis of the salt stress response in Arabidopsis roots |
| GSE7796 | 10 | Phenotypic diversity and altered environmental plasticity in Arabidopsis thaliana with reduced HSP90 levels |
| GSE7961 | 1 | affy_aba_ath1-Characterization of aba3-1 suppressor mutants |
| GSE8257 | 1 | Identification of KIN10-target genes in Arabidopsis mesophyll cells |
| GSE8279 | 2 | Transgenerational stability of the Arabidopsis epigenome is coordinated by CG methylation |
| GSE8319 | 2 | An LysM receptor-like kinase mediates chitin perception and fungal resistance in Arabidopsis |
| GSE8739 | 1 | Early gibberellin responses in Arabidopsis |
| GSE8741 | 3 | DELLA protein direct targets in Arabidopsis |
| GSE8745 | 1 | Low R : FR treatment at 16 and 22 degrees |
| GSE8787 | 4 | Expression analysis of the salt stress response in Arabidopsis mutants with defects in hair patterning |
| GSE9148 | 2 | Expression data of 10-day-old wild-type and chl1-5 plants exposed to 25 mM nitrate for 0 h or 0.5 h |
| GSE9201 | 4 | Identification of genes responding to the activity of the Arabidopsis cytochrome P450 KLUH/CYP78A5 |
| GSE9311 | 2 | Gene expression in roots and shoots of plants grown on selenate |
| GSE9408 | 1 | Identification of putative Arabidopsis DEMETER target genes by GeneChip analysis |
| GSE9605 | 3 | Target genes of AGAMOUS during early flower development in Arabidopsis |
| GSE9702 | 2 | Identification of putative targets of AP3/PI |
| GSE9719 | 6 | Dynamics of mRNA abundance and translation in response to short and prolonged hypoxia and reoxygenation |
| GSE9728 | 6 | COP9 signalosome (csn) mutant analysis |
| GSE9816 | 3 | Gene expression profiling of sav mutants |
| GSE9955 | 5 | MILDEW-INDUCED LESIONS 4 encodes a novel regulator of the salicylic acid defense response |
| GSE9957 | 3 | Expression profiling of the plant cell wall mutants: pmr5, pmr6, and pmr5 pmr6 double mutants |
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