Identification of Cassava MicroRNAs under Abiotic Stress

Table 1

Comparison of miRDeep-P, MIReNA, and Mircheck using default parameters. miRNAs predicted by each of the three methods were filtered using criteria described by Meyers et al. [12]. FPR: False positive rate.

		A. thaliana positive set	M. esculenta positive set	A. thaliana negative set	M. esculenta negative set
miRDeep-P	Sensitivity	5.04%	4.89%
	FPR			1.12%	0.99%
MIReNA	Sensitivity	6.52%	2.37%
	FPR			0%	0%
Mircheck	Sensitivity	7.69%	0.82%
	FPR			1.30%	0.03%