Gene Expression Profiling of Grass Carp (Ctenopharyngodon idellus) and Crisp Grass Carp

Table 4

Differentially expressed genes involved in carbohydrate metabolism in the muscle of crisp grass carp and grass carp.

Gene name	Affy-ID	Fold change
Glycolysis/gluconeogenesis
Aldehyde dehydrogenase-3 family, member D1	Dr.4094.1.S1_at	5.510521
T-box 24	Dr.18309.1.S1_at	5.279783
zgc:55970	Dr.24685.1.S1_at	1.887322
Hexokinase-2	Dr.10553.1.S1_at	1.760913
Enolase-3 (beta, muscle)	Dr.9746.4.S1_at	0.640655
Phosphofructokinase, muscle a	Dr.13621.1.A1_at	0.615103
Cytochrome c oxidase, subunit VIIc	Dr.7444.1.S1_at	0.380282
Cytochrome c oxidase subunit 1	Dr.20553.2.A1_at	0.223735
Pyruvate dehydrogenase (lipoamide) alpha-1a	Dr.2656.1.A1_at	0.152896
hexokinase-1	Dr.25364.1.A1_s_at	0.121231
Alcohol metabolic process
Acetylcholinesterase	Dr.15722.1.S1_at	4.445239
Hexokinase-2	Dr.10553.1.S1_at	1.760913
Phosphofructokinase, muscle a	Dr.13621.1.A1_at	0.645103
Enolase-3 (beta, muscle)	Dr.9746.4.S1_at	0.600655
Glycerophosphodiester phosphodiesterase domain containing-3	Dr.10416.1.S1_at	0.274577
Phosphatase and tensin homolog B (mutated in multiple advanced cancers 1)	Dr.5559.3.A1_at	0.195537
Pyruvate dehydrogenase (lipoamide) alpha 1a	Dr.2656.1.A1_at	0.152896
Hexokinase-1	Dr.25364.1.A1_s_at	0.121231

Fold change = (signal intensity of a gene in the muscle of crisp grass carp)/(signal intensity of the gene in the muscle of grass carp).