Research Article

Identification of Multiple Soluble Fe(III) Reductases in Gram-Positive Thermophilic Bacterium Thermoanaerobacter indiensis BSB-33

Table 3

PDB templates used by ESyPred3D program for three-dimensional structure prediction of proteins.

Bacteria/target proteinsTemplates (PDB ID)

T. indiensis
 LPD1Geobacillus stearothermophilus dihydrolipoamide dehydrogenase (1EBD)
 LPD2Geobacillus stearothermophilus dihydrolipoamide dehydrogenase (1EBD)
 TrxEscherichia coli thioredoxin reductase (1CL0)
 NAD(P)H-nitrite reductaseNovosphingobium aromaticivorans ferredoxin reductase ArR (3LXD)
 TdrMycobacterium tuberculosis thioredoxin reductase (2A87)
 ThioredoxinHyperstable thioredoxin from Precambrian period (2YJ7)
 Indolepyruvate ferredoxin oxidoreductasePyrococcus furiosus 2-keto acid:ferredoxin oxidoreductase subunit alpha (1YD7)
C. kluyveri
 BfmBCGeobacillus stearothermophilus dihydrolipoamide dehydrogenase (1EBD)
T. scotoductus
 TrxDeinococcus radiodurans thioredoxin reductase (2Q7V)
 LPDGeobacillus stearothermophilus dihydrolipoamide dehydrogenase (1EBD)
M. gryphiswaldense
 FeR5Escherichia coli thioredoxin reductase (1CL0)
D. desulfuricans
 MreEEscherichia coli thioredoxin reductase (1CL0)
 ThioredoxinDesulfovibrio vulgaris Hildenborough thioredoxin (2L6C)
 MreGPyrococcus furiosus 2-keto acid:ferredoxin oxidoreductase subunit alpha (1YD7)
T. maritima
 TRSalmonella enterica alkylhydroperoxide reductase subunit F AhpF (1HYU)