Table 2: QTLs analysis for cold tolerance in RIL population using CIM method.

TraitQTL ChromosomePosition (cM)Marker intervalLOD score (%)Additive effect

RGRqRGI-1-1140.4 SSR192 - SSR955.45 19.55−0.1379
qRGI-1-2147.2 TGS2380 - SSR1342.53 8.52−0.0888
qRGI-4-1410.4 LEag001 - SSR2142.06 6.020.0763
qRGI-9-197.8 TES623 - TGS7812.12 5.95−0.0617
qRGI-12-1128.0 Tom340-341 - SSR2554.26 11.33−0.1143

CIqCI-1-119.8 TES856 - TGS3773.25 0.950.0208
qCI-2-1218.0 SSR50 - SSR3592.96 10.34−0.0828
qCI-3-130.0 LEat019 - LEat0203.01 10.310.0776
qCI-9-1926.8 TGS321 - TGS2352.35 7.31−0.0652

The closer molecular marker to the QTL position.