International Journal of Genomics / 2016 / Article / Tab 3

Research Article

Transcriptome Analysis of Bovine Ovarian Follicles at Predeviation and Onset of Deviation Stages of a Follicular Wave

Table 3

List of upregulated genes in ODF1 versus PDF1 and their functions.

Gene symbolGenBank numberPDF1 RPKMODF1 RPKMFold changeFDR corrected valueGene product functions

GAPDHXM_001252511.31.9159.6531.919.83 × 10−11Microtubule and NAD binding
BOLA-NNM_001105651.114.28174.8812.50Unknown
PPP1R14ANM_001193070.16.0665.7511.088.98 × 10−10Smooth muscle contraction
LOC505676NM_001193296.114.04111.198.09Unknown
LOC100337308XM_002684003.13.7223.276.394.40 × 10−2Unknown
MT1ANM_001040492.226.50150.755.81Bind heavy metals
LOC100125916NM_001105487.114.8083.885.781.51 × 10−9Unknown
TNFAIP6NM_001007813.111.1746.614.261.06 × 10−3Cell-cell and cell-matrix interactions
BEX2NM_001077034.193.97345.003.75Mitochondrial apoptosis
GPR85NM_001075150.210.0635.543.614.05 × 10−2G-protein coupled receptor
PPM1KNM_001046474.134.75108.323.182.52 × 10−7Cellular survival and development
CYP19A1NM_174305.1656.881944.893.02Estrogen biosynthesis
MT1ENM_001114857.154.11152.162.872.61 × 10−9Bind heavy metals
ETNK2XM_002693881.122.3561.962.834.65 × 10−3Ethanolamine phosphorylation
CHST11NM_001192668.157.39154.722.756.77 × 10−9Biosynthesis chondroitin sulfate
MT2ANM_001075140.149.37130.492.704.16 × 10−7Bind heavy metals
PRSS23NM_001080306.158.01151.792.672.74 × 10−8Follicular atresia
TXNIPNM_001101875.298.64231.472.406.64 × 10−11Oxidative stress mediator
NPR3NM_174127.247.55106.352.285.93 × 10−4Natriuretic peptide hormone receptor
GREB1NM_001205631.135.1778.202.271.30 × 10−2Estrogen-stimulated cell proliferation
EIF4EBP1NM_001077893.1138.11294.072.171.30 × 10−11Mediates protein translation regulation
PIK3R1NM_174575.1113.42210.951.901.21 × 10−5Insulin actions metabolic
LRP8NM_001097565.11061.541897.641.82Sperm maturation
SCD5NM_001076945.1124.08210.971.744.25 × 10−4Energy metabolism
ENO1NM_174049.21005.451707.611.73Tumor suppressor
LDHANM_174099.2221.85366.731.693.41 × 10−7Affiliated with lncrna
SERPINE2NM_174669.26816.8511075.441.66Serine protease inhibitor
INHBANM_174363.25824.469440.241.65Regulate gonadal stromal cell proliferation
TMEM176BNM_001099145.1106.45170.391.632.16 × 10−2Dendritic cells maturation
OATNM_001034240.1395.42630.731.631.71 × 10−11Ornithine aminotransferase
CYP11A1NM_176644.2908.971425.871.60Cholesterol to pregnenolone
OBSL1XM_002685586.1221.33338.401.561.16 × 10−4Regulate ubiquitin ligase complex
ARFGAP3NM_001075974.1273.92418.221.565.26 × 10−6Gtpase-activating protein
ITGB5NM_174679.2153.24233.561.567.68 × 10−3Fibronectin receptor
INHANM_174094.36341.619658.831.55Gonadal hormone secretion
OPTNNM_001034602.1160.13243.401.555.92 × 10−3Affect cell death
PTGR1NM_001035281.1200.07301.661.549.40 × 10−4Inactivation of the chemotactic factor
STBD1XM_002688357.1143.24215.661.542.15 × 10−2Bind to carbohydrates
LOC532189XR_083049.1340.18510.181.535.69 × 10−7Carboxypeptidase
TMEM20NM_001076470.1191.10286.481.532.10 × 10−3Solute carrier
ECE1NM_181009.2461.24691.331.538.98 × 10−10Converts big endothelin-1 to endothelin-1
GNG10NM_001114512.1617.73918.261.527.59 × 10−13Signal transducer

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