Research Article

The Use of Genomics in Conservation Management of the Endangered Visayan Warty Pig (Sus cebifrons)

Table 3

Assessment of shared and island-specific variation. The vast majority of the SNPs, both coding and noncoding, are shared between islands, and only a very small portion may be specific. Note that this pertains a total of 4679012 SNPs, excluding fixed differences between S. scrofa and S. cebifrons, for which the minor allele count is at least two out of seven individuals, or 14 haplotypes.

ā€‰SharedPanay ()Negros ()

All (4679012 SNPs total)3969361457741251910
Synonymous1956521501190
Nonsynonymous tolerated10081918533
Nonsynonymous not-tolerated3370343171