International Journal of Genomics / 2016 / Article / Tab 1

Research Article

Lncident: A Tool for Rapid Identification of Long Noncoding RNAs Utilizing Sequence Intrinsic Composition and Open Reading Frame Information

Table 1

The performances on human dataset 2.

ToolsSensitivitySpecificityAccuracy-measureMCCKappa

CPC.local0.661310.83060.79610.70280.6612
CPC.web0.66250.99920.83090.79660.70280.6618
CPAT.local0.93330.98020.95680.95570.91450.9135
CPAT.web0.95350.96730.96040.96010.92080.9208
CNCI0.97020.91570.94300.94450.88730.8860
PLEK0.99520.89180.94350.94630.89180.8870
CPAT.train0.91600.98480.95040.94860.90290.9008
PLEK.train0.76220.95070.85650.84160.72600.7130
Lncident0.95350.97950.96650.96610.93330.9330

Lncident displayed a satisfying overall performance. CPC and CPAT were tested on stand-alone version and web server. suffix of “train” means CPAT and PLEK with the new-trained model.

Article of the Year Award: Outstanding research contributions of 2020, as selected by our Chief Editors. Read the winning articles.