Research Article

Regulation of Long Noncoding RNAs Responsive to Phytoplasma Infection in Paulownia tomentosa

Table 3

List of identified and characterized PaWB related to proteins in other species.

mRNA IDPTI/PTNr annotationFunction classificationReferenceSpecies

LCONS_00019384−1.72Ribonuclease 3-like proteinMetabolismKiyota et al. [48]Arabidopsis
LCONS_00004913−1.49Ribonuclease H proteinMetabolismCazenave et al. [49]Wheat
LCONS_00030149−1.34Histone-lysine N-methyltransferaseMetabolismPavankumar et al. [50]Arabidopsis
PAU022614.1−1.57Serine carboxypeptidase II-3MetabolismBullock et al. [51]Wheat
LCONS_000187381.09Proline-rich receptor-like protein kinase PERK1Cell signal transductionSilva et al. [52]Brassica napus
PAU002322.1−1.42Chlorophyll a-b binding protein of LHCII type 1PhotosynthesisChen et al. [53]Arabidopsis
PAU000284.1−2.56Photosystem II 10 kDa polypeptidePhotosynthesisAllahverdiyeva et al. [54]Arabidopsis
PAU011882.1−1.49ATP-binding cassette, sub-family G (WBC)TransportKlein et al. [55]Secale cereale
PAU023543.11.28Calcium-transporting ATPaseTransportBoursiac et al. [56]Arabidopsis
LCONS_000343352.54Glucan endo-1,3-beta-glucosidase 11Stress resistanceRol et al. [57]Sylvestris; tobacco
PAU030933.12.60Glucan endo-1,3-beta-glucosidase 11Stress resistanceRol et al. [57]Sylvestris; tobacco
LCONS_000130952.26Acetyltransferase NATA1-likeStress resistanceLou et al. [58]Arabidopsis
LCONS_000049171.37Zinc finger CCCH domain-containing protein 9Stress resistanceMaldonado-Bonilla et al. [59]Arabidopsis
LCONS_0002208114.72Zinc finger CCCH domain-containing protein 9Stress resistanceMaldonado-Bonilla et al. [59]Arabidopsis
PAU018908.12.57Disease-resistance proteinStress resistanceFan et al. [15]Paulownia
PAU030243.11.23Protein SRC2Stress resistanceKim et al. [60]Tobacco; pepper
LCONS_000230501.83Cytochrome P450 71A4Stress resistanceLiu et al. [2]Paulownia
LCONS_0002208214.33Xyloglucan endo-transglycosylase/hydrolaseGrowthNishikubo et al. [61]Poplar
LCONS_00004912−2.28Xyloglucan endotransglucosylase/hydrolaseGrowthNishikubo et al. [61]Poplar
PAU019848.1−2.14Xyloglucan endotransglucosylase/hydrolaseGrowthNishikubo et al. [61]Poplar
PAU005580.1−2.10Abscisic acid 8-hydroxylase 4GrowthSaito et al. [62]Arabidopsis
PAU003690.15.03MADS-box transcription factorGrowthMartel et al. [63]Tomato
PAU021151.1−1.12Protein bem46-likeGrowthRamírez et al. [64]Pleurotus ostreatus
PAU011878.1−1.09Zeaxanthin epoxidaseGrowthAudran et al. [65]Arabidopsis
PAU005061.12.03Uncharacterized protein
LCONS_00004914−1.83Uncharacterized protein
LCONS_000197695.34Hypothetical protein

Represents the known mRNA. Represents the novel mRNA predicted in this study.