Whole Genome Sequencing of Greater Amberjack (Seriola dumerili) for SNP Identification on Aligned Scaffolds and Genome Structural Variation Analysis Using Parallel Resequencing

Table 1

Summary statistics of the whole-genome sequence assembly of greater amberjack.

	Hiseq 2500	Hiseq + PacBio
Total bases	662,587,481 bp	677,669,644 bp
Number of scaffolds	34,824	11,655
Number of gaps	32,742	9742
Mean of scaffolds	19,026 bp	19,554 bp
Longest bases	22,167,742 bp	24,919,768 bp
N50	4,989,656 bp	5,812,906 bp
Number of >2Kb	724	707
Total bases (>2Kb)	655,539,910 bp	670,698,073 bp

The HiSeq 2500 sequence assembly was compared with the HiSeq 2500 sequence data mapped onto the PacBio RSII sequence data.