Discovery of Functional SNPs via Genome-Wide Exploration of Malaysian Pigmented Rice Varieties

Table 4

Annotation of nonsynonymous SNPs with polymorhic sites in Pfam family.

Functional gene classifications	Pfam name and ID	Number of SNPs
Stress responsive	AIG1 family (PF04548); Ubiquitin-conjugating enzyme (PF00179); NB-ARC domain (PF00931); Protein tyrosine kinase (PF07714)	5
Metabolism	Glycosyltransferase family 43; Cytochrome P450	2
Transporter	Mitochondrial carrier protein; ABC transporter	2
Transcription factor	Myb-like DNA-binding domain; AP2 domain; IQ calmodulin-binding motif; SNF2 family N-terminal domain	4